halophFGD

Basic Information

Locus ID: Ag10G02694

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: kinase-like protein TMKL1

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	233162091	233164950	-	Ag10G02694

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.14	39,849.01 Da	41.80	107.46	-0.02

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	80	347	1.7E-28	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	79	351	8.86E-48	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	154	354	1.4E-40	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	64	153	1.8E-6	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	76	353	28.258825	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G07620.1	Protein kinase superfamily protein.
RefSeq	XP_017257116.1	PREDICTED: LOW QUALITY PROTEIN: putative kinase-like protein TMKL1 [Daucus carota subsp. sativus]
Swiss-Prot	P33543	Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana OX=3702 GN=TMKL1 PE=1 SV=1
TrEMBL	A0A161ZYU2	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020175 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.768167	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.967695	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.698844	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.744498	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.945647	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.19389	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.559991	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	6.436927	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	4.700249	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	7.232343	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	4.93528	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	5.195799	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	3.726421	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	4.933503	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	3.557053	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	3.420808	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	1.626173	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	1.062139	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.702286	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.609422	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.835901	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	2.004571	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	2.103167	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.913535	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	1.639903	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	2.075234	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	1.62061	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	2.627231	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	2.275678		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	1.594763		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	1.029629		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.783795		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	1.126329		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.798697		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.675448		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	2.134374		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	1.945431		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	2.899556	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.885151	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	1.531325	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.06906	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.183671	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.201456	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.044105	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.440447	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	3.469365	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	2.378697	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	2.427028	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg14129, jg2437, jg34045
Aizoaceae	Mesembryanthemum crystallinum	1	gene_16008
Amaranthaceae	Atriplex hortensis	1	Ah018184
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg15187, Sbi_jg56016
Amaranthaceae	Salicornia europaea	1	Seu_jg26495
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00020207
Amaranthaceae	Suaeda glauca	2	Sgl02215, Sgl07371
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000029427, gene:ENSEOMG00000042963
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.3AG0009120, CQ.Regalona.r1.3BG0009430
Anacardiaceae	Pistacia vera	1	pistato.v30187530
Apiaceae	Apium graveolens	1	Ag10G02694
Arecaceae	Cocos nucifera	1	COCNU_10G003590
Arecaceae	Phoenix dactylifera	2	gene-LOC103704654, gene-LOC103716327
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.3200.V1.1, AsparagusV1_10.754.V1.1
Asteraceae	Flaveria trinervia	4	Ftri17G22912, Ftri18G06390, Ftri6G31384, Ftri9G05106
Brassicaceae	Arabidopsis thaliana	2	AT5G07620.1, AT5G61570.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10004479m.g.v1.0, Thhalv10013915m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g24770.v2.2, Sp6g35260.v2.2
Brassicaceae	Brassica nigra	2	BniB02g053340.2N, BniB08g003350.2N
Casuarinaceae	Casuarina equisetifolia	1	CeqSG0251
Casuarinaceae	Casuarina glauca	1	Cgl03G1267
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno14g08370
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g20630
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG01.2382
Plantaginaceae	Plantago ovata	1	Pov_00012345
Plumbaginaceae	Limonium bicolor	1	Lb4G23702
Poaceae	Echinochloa crus-galli	7	AH07.2861, AH09.1818, BH07.2679, BH09.1989, CH07.2730 ... CH07.2738, CH09.2138
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0139640, gene-QOZ80_2BG0195320 ... gene-QOZ80_4AG0308430, gene-QOZ80_4BG0339410
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0189950.1, HORVU.MOREX.r3.6HG0600660.1
Poaceae	Lolium multiflorum	2	gene-QYE76_024121, gene-QYE76_045363
Poaceae	Oryza coarctata	4	Oco03G017130, Oco04G017860, Oco07G012270, Oco08G011990
Poaceae	Oryza sativa	2	LOC_Os02g43870.1, LOC_Os04g46320.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G217400, gene-BS78_06G179500
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0203954, Pt_Chr0204024, Pt_Chr0301793, Pt_Chr0301809
Poaceae	Sporobolus alterniflorus	6	Chr06G005940, Chr09G024410, Chr13G005840, Chr15G007570 ... Chr23G007260, Chr26G012500
Poaceae	Thinopyrum elongatum	2	Tel2E01G709600, Tel6E01G460100
Poaceae	Triticum dicoccoides	5	gene_TRIDC2AG060110, gene_TRIDC2BG063550 ... gene_TRIDC6AG037700, gene_TRIDC6BG012870, gene_TRIDC6BG044620
Poaceae	Triticum aestivum	7	TraesCS2A02G416400.1, TraesCS2B02G435300.1 ... TraesCS2D02G413400.1, TraesCS6A02G244100.1, TraesCS6A02G244300.1, TraesCS6B02G280100.1, TraesCS6D02G226500.2
Poaceae	Zea mays	4	Zm00001eb074870_P001, Zm00001eb186420_P002 ... Zm00001eb249390_P001, Zm00001eb429850_P001
Poaceae	Zoysia japonica	4	nbis-gene-37263, nbis-gene-5470, nbis-gene-9282 ... nbis-gene-9283
Poaceae	Zoysia macrostachya	4	Zma_g14042, Zma_g16798, Zma_g20180, Zma_g21736
Portulacaceae	Portulaca oleracea	1	evm.TU.LG11.1483
Posidoniaceae	Posidonia oceanica	1	gene.Posoc06g13420
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.1245, evm.TU.Scaffold_4_RagTag.208
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-12435, nbisL1-mrna-12546, nbisL1-mrna-29143
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-18620, nbisL1-mrna-6845
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-12814, nbisL1-mrna-2087
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000008l.126, evm.TU.utg000010l.284
Rhizophoraceae	Kandelia obovata	2	Maker00001237, Maker00008888
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-2402, nbisL1-mrna-577
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-6202, nbisL1-mrna-8882
Salicaceae	Populus euphratica	1	populus_peu08179
Solanaceae	Lycium barbarum	1	gene-LOC132631679
Solanaceae	Solanum chilense	1	SOLCI007312600
Solanaceae	Solanum pennellii	1	gene-LOC107012131
Tamaricaceae	Reaumuria soongarica	1	gene_5371
Tamaricaceae	Tamarix chinensis	1	TC05G0186
Zosteraceae	Zostera marina	1	Zosma05g30590.v3.1