HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ag10G02517
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 229683639 229689209 + Ag10G02517
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.01 28,263.85 Da 32.21 93.49 -0.33
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00051 EFh 145 213 2.64823E-8 IPR002048
Pfam PF13202 EF hand 196 213 3.1E-4 IPR002048
Pfam PF03145 Seven in absentia protein family 1 75 3.2E-24 IPR018121
SUPERFAMILY SSF47473 EF-hand 142 238 3.29E-20 IPR011992
SUPERFAMILY SSF49599 TRAF domain-like 2 79 1.44E-14 -
Gene3D G3DSA:1.10.238.10 - 144 226 7.2E-18 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 75 1.6E-24 IPR008974
SMART SM00054 efh_1 188 216 28.0 IPR002048
SMART SM00054 efh_1 144 172 0.57 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 184 219 9.296966 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 140 175 10.217514 IPR002048
Gene Ontology
Biological Process:
GO:0006511 (ubiquitin-dependent protein catabolic process) GO:0007275 (multicellular organism development)
Molecular Function:
GO:0005509 (calcium ion binding) GO:0005515 (protein binding)
Cellular Component:
GO:0005737 (cytoplasm)
KEGG Pathway
KO Term:
K04506 (E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27])
Pathway:
ko04013 (MAPK signaling pathway - fly) map04013 (MAPK signaling pathway - fly) map04115 (p53 signaling pathway) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G53360.2 - 0
RefSeq XP_017257686.1 PREDICTED: calcineurin B-like protein 7 isoform X3 [Daucus carota subsp. sativus] 0
Swiss-Prot Q8S3N1 E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2 0
TrEMBL A0A164WVF6 Calcineurin B-like protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020322 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
PRJNA723697SRX1069225214.278924Shengqin NO.2seedS1-1S1-1initial formation stage (S1)
PRJNA723697SRX1069225413.418321Shengqin NO.2seedS1-3S1-3initial formation stage (S1)
PRJNA723697SRX1069225511.903014Shengqin NO.2seedS3-1S3-1middle development stage (S3)
PRJNA723697SRX1069225612.54501Shengqin NO.2seedS3-2S3-2middle development stage (S3)
PRJNA723697SRX1069225717.206823Shengqin NO.2seedS3-3S3-3middle development stage (S3)
PRJNA723697SRX1069225818.274883Shengqin NO.2seedS5-1S5-1maturation stage (S5)
PRJNA723697SRX1069225918.239948Shengqin NO.2seedS5-2S5-2maturation stage (S5)
PRJNA723697SRX1069226020.158495Shengqin NO.2seedS5-3S5-3maturation stage (S5)
PRJNA884666SRX1772927222.259344celeryantherW99A-r1male sterile line 
PRJNA884666SRX1772927317.048777celeryantherW99A-r2male sterile line 
PRJNA884666SRX1772927420.370358celeryantherW99A-r3male sterile line 
PRJNA884666SRX1772927521.004276celeryantherW99B-r1maintainer line
PRJNA884666SRX1772927620.136673celeryantherW99B-r2maintainer line
PRJNA884666SRX1772927720.958813celeryantherW99B-r3maintainer line
PRJNA884180SRX1774388947.260273var. secalinum YablochnycollenchymaCol_S1_rep1-1
PRJNA884180SRX1774805631.495697var. secalinum YablochnycollenchymaCol_S1_rep3biological replicate 3
PRJNA884180SRX1774805737.112381var. secalinum YablochnycollenchymaCol_S1_rep4biological replicate 4
PRJNA884180SRX1774867825.087748var. secalinum YablochnyparenchymaPar_S1_rep1Biological replicate 1
PRJNA884180SRX1774867933.561527var. secalinum YablochnyparenchymaPar_S1_rep2Biological replicate 2
PRJNA884180SRX1774868025.839146var. secalinum YablochnyparenchymaPar_S1_rep3Biological replicate 3
PRJNA884180SRX1774868127.978371var. secalinum YablochnyparenchymaPar_S1_rep4Biological replicate 4
PRJNA884180SRX1774889836.120457var. secalinum Yablochnyvascular bundleVas_S1_rep1Biological replicate 1
PRJNA884180SRX1774889932.557545var. secalinum Yablochnyvascular bundleVas_S1_rep2Biological replicate 2
PRJNA884180SRX1774890037.014385var. secalinum Yablochnyvascular bundleVas_S1_rep3Biological replicate 3
PRJNA884180SRX1774890134.052319var. secalinum Yablochnyvascular bundleVas_S1_rep4Biological replicate 4
PRJNA884180SRX1774912919.11834var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep1Biological replicate 1
PRJNA884180SRX1774913023.317823var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep2Biological replicate 2
PRJNA884180SRX1774913115.916461var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep3Biological replicate 3
PRJNA884180SRX1774913223.161804var. secalinum Yablochnypart of the celery petiole without collenchyma strandsCollenchyma-free_S1_rep4Biological replicate 4
PRJNA1124269SRX2493641120.41481leafCK1replicate=biological replicate1
PRJNA1124269SRX2493641220.355175leafCK2replicate=biological replicate2
PRJNA1124269SRX2493641316.514673leafCK3replicate=biological replicate3
PRJNA1124269SRX2493641420.65674leafD1replicate=biological replicate1
PRJNA1124269SRX2493641541.087902leafD2replicate=biological replicate2
PRJNA1124269SRX2493641624.89296leafD3replicate=biological replicate3
PRJNA1124269SRX2493641727.984509leafMD1replicate=biological replicate1
PRJNA1124269SRX2493641825.033587leafMD2replicate=biological replicate2
PRJNA1124269SRX2493641927.560846leafMD3replicate=biological replicate3
PRJNA387092SRX283330913.948777shanghaihuangxinleafleaves between 0.5 and 1 cm in breadth, folded;stage 2
PRJNA387092SRX283332112.689153shanghaihuangxinleafleaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sionstage 5
PRJNA387092SRX283332311.112505shanghaihuangxinleafleaves >3 cm, unfolded, with clearstem extensionstage 7
PRJNA543957SRX587959861.158176Zhangzhou lvqingstemSe3100 ppm Na2SeO4
PRJNA543957SRX587959973.112175Zhangzhou lvqingstemSe2100 ppm Na2SeO4
PRJNA543957SRX587960058.565052Zhangzhou lvqingstemMock2mock
PRJNA543957SRX587960156.713654Zhangzhou lvqingstemMock1mock
PRJNA543957SRX587960270.237518Zhangzhou lvqingstemSe1100 ppm Na2SeO4
PRJNA543957SRX587960346.04982Zhangzhou lvqingstemMock3mock
PRJNA609149SRX781591761.318024Jinnan Shiqinflower budearly flower budearly flower bud
PRJNA609149SRX7815918104.06929Jinnan Shiqinflower budmiddle flower budmiddle flower bud
PRJNA609149SRX781591993.709587Jinnan Shiqinflower budearly flowering periodearly flowering period
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 13 jg10259, jg13880, jg2007, jg20519, jg21759, jg2188, jg23572 ...
jg29454, jg33930, jg37015, jg38448, jg4563, jg4919
Aizoaceae Mesembryanthemum crystallinum 9 gene_0, gene_12124, gene_14938, gene_1626, gene_1627 ...
gene_2236, gene_2237, gene_3316, gene_8096
Amaranthaceae Atriplex hortensis 9 Ah003891, Ah003892, Ah003893, Ah003894, Ah004132, Ah009097 ...
Ah018617, Ah022851, Ah034581
Amaranthaceae Beta vulgaris 5 BVRB_1g003040, BVRB_3g051930, BVRB_4g090720, BVRB_5g098630 ...
BVRB_5g105420
Amaranthaceae Salicornia bigelovii 13 Sbi_jg15079, Sbi_jg18548, Sbi_jg21997, Sbi_jg24057 ...
Sbi_jg24285, Sbi_jg29644, Sbi_jg36947, Sbi_jg3945, Sbi_jg49161, Sbi_jg55889, Sbi_jg7900, Sbi_jg7901, Sbi_jg8115
Amaranthaceae Salicornia europaea 6 Seu_jg11905, Seu_jg12141, Seu_jg15753, Seu_jg26387 ...
Seu_jg4818, Seu_jg6084
Amaranthaceae Suaeda aralocaspica 7 GOSA_00000588, GOSA_00010664, GOSA_00010847, GOSA_00010848 ...
GOSA_00017307, GOSA_00018128, GOSA_00020075
Amaranthaceae Suaeda glauca 14 Sgl01332, Sgl06412, Sgl10904, Sgl16258, Sgl16296, Sgl23590 ...
Sgl28788, Sgl51138, Sgl52248, Sgl52249, Sgl56443, Sgl57502, Sgl63087, Sgl67699
Amaranthaceae Chenopodium album 20 gene:ENSEOMG00000003593, gene:ENSEOMG00000005352 ...
gene:ENSEOMG00000007086, gene:ENSEOMG00000007987, gene:ENSEOMG00000008857, gene:ENSEOMG00000013043, gene:ENSEOMG00000017442, gene:ENSEOMG00000019879, gene:ENSEOMG00000020484, gene:ENSEOMG00000023854, gene:ENSEOMG00000024553, gene:ENSEOMG00000029740, gene:ENSEOMG00000030432, gene:ENSEOMG00000033547, gene:ENSEOMG00000040533, gene:ENSEOMG00000043596, gene:ENSEOMG00000044528, gene:ENSEOMG00000044546, gene:ENSEOMG00000045742, gene:ENSEOMG00000051577
Amaranthaceae Chenopodium quinoa 15 CQ.Regalona.r1.1AG0002210, CQ.Regalona.r1.2AG0014490 ...
CQ.Regalona.r1.2BG0000670, CQ.Regalona.r1.2BG0016460, CQ.Regalona.r1.3AG0013690, CQ.Regalona.r1.3AG0024220, CQ.Regalona.r1.3BG0005190, CQ.Regalona.r1.4BG0026230, CQ.Regalona.r1.5AG0003630, CQ.Regalona.r1.5AG0005680, CQ.Regalona.r1.5BG0003910, CQ.Regalona.r1.5BG0005970, CQ.Regalona.r1.8AG0010320, CQ.Regalona.r1.9AG0007070, CQ.Regalona.r1.9AG0009030
Anacardiaceae Pistacia vera 11 pistato.v30066200, pistato.v30116580, pistato.v30134210 ...
pistato.v30141690, pistato.v30151820, pistato.v30152180, pistato.v30164570, pistato.v30164580, pistato.v30165070, pistato.v30254560, pistato.v30254570
Apiaceae Apium graveolens 10 Ag10G02517, Ag11G03814, Ag4G02663, Ag4G02664, Ag5G02501 ...
Ag6G00742, Ag6G02114, Ag7G01866, Ag9G01092, AgUnG00359
Arecaceae Cocos nucifera 7 COCNU_01G006620, COCNU_01G013360, COCNU_06G001760 ...
COCNU_07G004770, COCNU_10G003180, COCNU_14G003330, scaffold008923G000010
Arecaceae Phoenix dactylifera 9 gene-LOC103702369, gene-LOC103710773, gene-LOC103711181 ...
gene-LOC103712856, gene-LOC103712857, gene-LOC103714201, gene-LOC103714203, gene-LOC103716791, gene-LOC103721260
Asparagaceae Asparagus officinalis 9 AsparagusV1_01.501.V1.1, AsparagusV1_01.527.V1.1 ...
AsparagusV1_03.2990.V1.1, AsparagusV1_04.3141.V1.1, AsparagusV1_05.1991.V1.1, AsparagusV1_05.2182.V1.1, AsparagusV1_07.139.V1.1, AsparagusV1_08.503.V1.1, AsparagusV1_10.824.V1.1
Asteraceae Flaveria trinervia 13 Ftri14G20633, Ftri14G21056, Ftri15G27268, Ftri16G08952 ...
Ftri17G31094, Ftri1G05862, Ftri2G26065, Ftri3G15446, Ftri3G16172, Ftri4G29048, Ftri7G09630, Ftri7G17431, Ftri7G26795
Brassicaceae Arabidopsis thaliana 10 AT1G64480.1, AT4G01420.1, AT4G16350.1, AT4G17615.1 ...
AT4G26560.1, AT4G26570.2, AT4G33000.1, AT5G24270.1, AT5G47100.1, AT5G55990.1
Brassicaceae Eutrema salsugineum 9 Thhalv10001023m.g.v1.0, Thhalv10004891m.g.v1.0 ...
Thhalv10014594m.g.v1.0, Thhalv10023688m.g.v1.0, Thhalv10026019m.g.v1.0, Thhalv10026170m.g.v1.0, Thhalv10026227m.g.v1.0, Thhalv10027149m.g.v1.0, Thhalv10028908m.g.v1.0
Brassicaceae Schrenkiella parvula 11 Sp2g00270.v2.2, Sp2g11910.v2.2, Sp2g23100.v2.2 ...
Sp6g01370.v2.2, Sp6g07129.v2.2, Sp6g07131.v2.2, Sp6g17840.v2.2, Sp7g14860.v2.2, Sp7g16540.v2.2, Sp7g24530.v2.2, Sp7g30760.v2.2
Brassicaceae Brassica nigra 16 BniB02g034750.2N, BniB02g042400.2N, BniB02g077120.2N ...
BniB02g082520.2N, BniB02g086100.2N, BniB03g009650.2N, BniB04g003410.2N, BniB04g010410.2N, BniB04g015240.2N, BniB04g023220.2N, BniB05g005060.2N, BniB05g010830.2N, BniB05g018760.2N, BniB05g020060.2N, BniB05g035670.2N, BniB07g040220.2N
Casuarinaceae Casuarina equisetifolia 8 Ceq01G0532, Ceq01G1521, Ceq02G0883, Ceq02G1425, Ceq03G0548 ...
Ceq03G0549, Ceq03G2256, Ceq09G1627
Casuarinaceae Casuarina glauca 8 Cgl01G0620, Cgl01G1686, Cgl02G0894, Cgl02G1470, Cgl03G0656 ...
Cgl03G0657, Cgl03G2391, Cgl09G1760
Cymodoceaceae Cymodocea nodosa 8 gene.Cymno02g13070, gene.Cymno07g04620, gene.Cymno12g03290 ...
gene.Cymno13g03910, gene.Cymno13g03920, gene.Cymno15g04140, gene.Cymno16g01230, gene.Cymno18g03450
Dunaliellaceae Dunaliella salina 2 Dusal.0008s00018.v1.0, Dusal.0181s00027.v1.0
Hydrocharitaceae Thalassia testudinum 6 gene.Thate02g04390, gene.Thate03g18610, gene.Thate03g24470 ...
gene.Thate04g18510, gene.Thate08g08700, gene.Thate09g07860
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-1471, nbisL1-mrna-1545, nbisL1-mrna-9019
Nitrariaceae Nitraria sibirica 10 evm.TU.LG05.1112, evm.TU.LG05.1113, evm.TU.LG05.2076 ...
evm.TU.LG07.897, evm.TU.LG08.1306, evm.TU.LG09.583, evm.TU.LG10.1102, evm.TU.LG10.1553, evm.TU.LG11.277, evm.TU.LG12.1295
Plantaginaceae Plantago ovata 8 Pov_00005396, Pov_00010833, Pov_00012722, Pov_00018280 ...
Pov_00033503, Pov_00038250, Pov_00039159, Pov_00041158
Plumbaginaceae Limonium bicolor 12 Lb1G03681, Lb1G03701, Lb1G04178, Lb1G05136, Lb2G08628 ...
Lb2G11855, Lb2G12778, Lb2G13987, Lb3G16943, Lb5G27170, Lb6G31201, Lb6G31204
Poaceae Echinochloa crus-galli 24 AH01.1196, AH02.2116, AH02.2228, AH02.2941, AH05.1620 ...
AH05.266, AH07.1430, BH01.3209, BH02.2184, BH02.2329, BH02.3024, BH05.1767, BH05.310, BH05.4032, BH07.1389, BH07.1750, CH01.1453, CH01.3440, CH02.2339, CH02.2503, CH04.2203, CH05.362, CH07.1106, CH07.1603
Poaceae Eleusine coracana subsp. coracana 19 gene-QOZ80_1AG0021840, gene-QOZ80_1AG0030800 ...
gene-QOZ80_1BG0071770, gene-QOZ80_1BG0080750, gene-QOZ80_2AG0109900, gene-QOZ80_2AG0109910, gene-QOZ80_2AG0117070, gene-QOZ80_2BG0163220, gene-QOZ80_2BG0163230, gene-QOZ80_2BG0170750, gene-QOZ80_2BG0186300, gene-QOZ80_3AG0225810, gene-QOZ80_3BG0270600, gene-QOZ80_5AG0365460, gene-QOZ80_5AG0382440, gene-QOZ80_5AG0396570, gene-QOZ80_5BG0413280, gene-QOZ80_5BG0429340, gene-QOZ80_5BG0444840
Poaceae Hordeum vulgare 11 HORVU.MOREX.r3.1HG0057470.1, HORVU.MOREX.r3.1HG0065890.1 ...
HORVU.MOREX.r3.1HG0081480.2, HORVU.MOREX.r3.1HG0081490.1, HORVU.MOREX.r3.1HG0081510.1, HORVU.MOREX.r3.3HG0227570.2, HORVU.MOREX.r3.3HG0284350.1, HORVU.MOREX.r3.4HG0341030.1, HORVU.MOREX.r3.4HG0418720.1, HORVU.MOREX.r3.5HG0436600.1, HORVU.MOREX.r3.5HG0457980.1
Poaceae Lolium multiflorum 19 gene-QYE76_000645, gene-QYE76_002956, gene-QYE76_008126 ...
gene-QYE76_012794, gene-QYE76_016117, gene-QYE76_016118, gene-QYE76_016119, gene-QYE76_016120, gene-QYE76_016121, gene-QYE76_016178, gene-QYE76_016179, gene-QYE76_016180, gene-QYE76_016181, gene-QYE76_022231, gene-QYE76_053437, gene-QYE76_053578, gene-QYE76_053605, gene-QYE76_054871, gene-QYE76_062961
Poaceae Oryza coarctata 22 Oco01G001000, Oco01G013150, Oco01G018610, Oco02G013310 ...
Oco02G014110, Oco02G018940, Oco03G008030, Oco03G008060, Oco03G010240, Oco04G008400, Oco04G008410, Oco04G010570, Oco05G018450, Oco06G019220, Oco10G015080, Oco11G005880, Oco19G010470, Oco20G010280, Oco23G002330, Oco23G009730, Oco24G001850, Oco24G009440
Poaceae Oryza sativa 13 LOC_Os01g39770.1, LOC_Os01g41510.1, LOC_Os01g51420.1 ...
LOC_Os02g18880.1, LOC_Os02g18930.1, LOC_Os02g27880.1, LOC_Os02g27940.1, LOC_Os03g33570.1, LOC_Os03g42840.1, LOC_Os05g45810.1, LOC_Os10g41510.1, LOC_Os12g06510.1, LOC_Os12g40510.1
Poaceae Paspalum vaginatum 10 gene-BS78_01G149800, gene-BS78_01G282300 ...
gene-BS78_03G172700, gene-BS78_03G184100, gene-BS78_03G253000, gene-BS78_04G124900, gene-BS78_04G135500, gene-BS78_08G034200, gene-BS78_08G131000, gene-BS78_09G214000
Poaceae Puccinellia tenuiflora 21 Pt_Chr0101069, Pt_Chr0101179, Pt_Chr0101539, Pt_Chr0101553 ...
Pt_Chr0104433, Pt_Chr0201883, Pt_Chr0201887, Pt_Chr0303479, Pt_Chr0303505, Pt_Chr0305735, Pt_Chr0305748, Pt_Chr0503238, Pt_Chr0503279, Pt_Chr0503948, Pt_Chr0602469, Pt_Chr0602890, Pt_Chr0602930, Pt_Chr0603107, Pt_Chr0603197, Pt_Chr0603225, Pt_Chr0704234
Poaceae Sporobolus alterniflorus 30 Chr01G014620, Chr02G011460, Chr02G016280, Chr03G009560 ...
Chr03G009570, Chr03G014780, Chr04G018410, Chr04G022640, Chr05G016970, Chr05G017630, Chr06G019150, Chr06G024420, Chr06G027490, Chr06G031450, Chr07G023290, Chr08G014840, Chr09G000690, Chr09G000700, Chr09G005320, Chr0G026330, Chr0G030340, Chr12G022300, Chr13G019530, Chr15G018570, Chr18G015500, Chr19G012440, Chr20G006610, Chr22G002780, Chr27G003490, Chr29G006290
Poaceae Thinopyrum elongatum 17 Tel1E01G000800, Tel1E01G367400, Tel1E01G430900 ...
Tel1E01G539800, Tel1E01G539900, Tel1E01G540000, Tel1E01G555300, Tel1E01G555500, Tel2E01G952300, Tel3E01G098700, Tel3E01G098800, Tel3E01G099000, Tel3E01G421500, Tel4E01G112800, Tel4E01G616800, Tel5E01G130000, Tel5E01G227600
Poaceae Triticum dicoccoides 22 gene_TRIDC1AG032600, gene_TRIDC1AG039010 ...
gene_TRIDC1AG051930, gene_TRIDC1BG037940, gene_TRIDC1BG044360, gene_TRIDC1BG057670, gene_TRIDC1BG059700, gene_TRIDC1BG059710, gene_TRIDC1BG059720, gene_TRIDC3AG006110, gene_TRIDC3AG031000, gene_TRIDC3BG008220, gene_TRIDC3BG035650, gene_TRIDC4AG021690, gene_TRIDC4AG038630, gene_TRIDC4BG010760, gene_TRIDC5AG009510, gene_TRIDC5AG021240, gene_TRIDC5AG077070, gene_TRIDC5BG011070, gene_TRIDC5BG021850, gene_TRIDC7BG058400
Poaceae Triticum aestivum 34 TraesCS1A02G215800.1, TraesCS1A02G261200.1 ...
TraesCS1A02G352200.1, TraesCS1B02G229300.1, TraesCS1B02G272000.1, TraesCS1B02G357200.1, TraesCS1B02G370500.1, TraesCS1B02G370600.1, TraesCS1B02G370800.1, TraesCS1B02G370900.1, TraesCS1D02G261200.1, TraesCS1D02G346400.1, TraesCS1D02G346500.1, TraesCS1D02G358200.2, TraesCS1D02G358400.1, TraesCS3A02G053300.1, TraesCS3A02G208300.2, TraesCS3B02G064500.2, TraesCS3B02G235500.1, TraesCS3D02G211300.1, TraesCS4A02G245500.1, TraesCS4B02G069900.1, TraesCS4B02G379200.1, TraesCS4D02G068700.1, TraesCS4D02G162400.1, TraesCS5A02G060600.1, TraesCS5A02G124700.1, TraesCS5A02G545500.2, TraesCS5B02G071500.1, TraesCS5B02G124300.1, TraesCS5D02G072100.1, TraesCS5D02G132500.2, TraesCSU02G129500.1, TraesCSU02G178500.1
Poaceae Zea mays 13 Zm00001eb023890_P002, Zm00001eb030890_P001 ...
Zm00001eb051150_P001, Zm00001eb135370_P001, Zm00001eb139490_P001, Zm00001eb160330_P001, Zm00001eb161280_P001, Zm00001eb203330_P001, Zm00001eb293130_P001, Zm00001eb346310_P001, Zm00001eb390900_P003, Zm00001eb407510_P001, Zm00001eb407520_P001
Poaceae Zoysia japonica 15 nbis-gene-12725, nbis-gene-19018, nbis-gene-21559 ...
nbis-gene-25042, nbis-gene-25581, nbis-gene-29424, nbis-gene-30484, nbis-gene-34081, nbis-gene-36393, nbis-gene-39691, nbis-gene-44612, nbis-gene-45192, nbis-gene-45196, nbis-gene-46326, nbis-gene-54201
Poaceae Zoysia macrostachya 15 Zma_g10601, Zma_g12605, Zma_g12606, Zma_g12934, Zma_g15315 ...
Zma_g16321, Zma_g22948, Zma_g24777, Zma_g25277, Zma_g25519, Zma_g26068, Zma_g28672, Zma_g8110, Zma_g8522, Zma_g920
Portulacaceae Portulaca oleracea 25 evm.TU.LG01.108, evm.TU.LG01.1548, evm.TU.LG01.323 ...
evm.TU.LG02.613, evm.TU.LG02.82, evm.TU.LG04.3160, evm.TU.LG04.3259, evm.TU.LG04.429, evm.TU.LG06.1711, evm.TU.LG06.1712, evm.TU.LG06.1713, evm.TU.LG07.768, evm.TU.LG08.75, evm.TU.LG09.1312, evm.TU.LG09.2066, evm.TU.LG10.123, evm.TU.LG10.830, evm.TU.LG10.963, evm.TU.LG14.799, evm.TU.LG14.802, evm.TU.LG15.161, evm.TU.LG16.441, evm.TU.LG17.122, evm.TU.LG17.826, evm.TU.LG17.953
Posidoniaceae Posidonia oceanica 6 gene.Posoc07g05650, gene.Posoc08g11060, gene.Posoc08g14630 ...
gene.Posoc09g05170, gene.Posoc09g10030, gene.Posoc10g08170
Rhizophoraceae Bruguiera sexangula 11 evm.TU.Scaffold_10_RagTag.1352, evm.TU.Scaffold_14_RagTag.91 ...
evm.TU.Scaffold_10_RagTag.720, evm.TU.Scaffold_14_RagTag.438, evm.TU.Scaffold_16_RagTag.399, evm.TU.Scaffold_18_RagTag.652, evm.TU.Scaffold_1_RagTag.634, evm.TU.Scaffold_2_RagTag.1644, evm.TU.Scaffold_5_RagTag.620, evm.TU.Scaffold_7_RagTag.47, evm.TU.Scaffold_8_RagTag.352
Rhizophoraceae Carallia pectinifolia 14 nbisL1-mrna-10733, nbisL1-mrna-13773, nbisL1-mrna-17915 ...
nbisL1-mrna-18313, nbisL1-mrna-22317, nbisL1-mrna-27675, nbisL1-mrna-27751, nbisL1-mrna-3565, nbisL1-mrna-3566, nbisL1-mrna-7081, nbisL1-mrna-7488, nbisL1-mrna-8557, nbisL1-mrna-8626, nbisL1-mrna-9917
Rhizophoraceae Ceriops tagal 10 nbisL1-mrna-10112, nbisL1-mrna-13584, nbisL1-mrna-14667 ...
nbisL1-mrna-17198, nbisL1-mrna-20854, nbisL1-mrna-2908, nbisL1-mrna-3329, nbisL1-mrna-3842, nbisL1-mrna-4028, nbisL1-mrna-8868
Rhizophoraceae Ceriops zippeliana 11 nbisL1-mrna-11279, nbisL1-mrna-14017, nbisL1-mrna-15033 ...
nbisL1-mrna-17956, nbisL1-mrna-22356, nbisL1-mrna-5656, nbisL1-mrna-8036, nbisL1-mrna-8295, nbisL1-mrna-8638, nbisL1-mrna-8769, nbisL1-mrna-8967
Rhizophoraceae Kandelia candel 11 evm.TU.utg000004l.70, evm.TU.utg000006l.670 ...
evm.TU.utg000007l.110, evm.TU.utg000007l.340, evm.TU.utg000009l.317, evm.TU.utg000012l.396, evm.TU.utg000018l.18, evm.TU.utg000022l.253, evm.TU.utg000023l.66, evm.TU.utg000028l.25, evm.TU.utg000033l.504
Rhizophoraceae Kandelia obovata 12 Maker00002747, Maker00003055, Maker00004274, Maker00005865 ...
Maker00010740, Maker00011394, Maker00013255, Maker00014223, Maker00015144, Maker00018365, Maker00018510, Maker00018745
Rhizophoraceae Rhizophora apiculata 11 nbisL1-mrna-10234, nbisL1-mrna-15961, nbisL1-mrna-16196 ...
nbisL1-mrna-16450, nbisL1-mrna-2747, nbisL1-mrna-3234, nbisL1-mrna-3394, nbisL1-mrna-3882, nbisL1-mrna-7407, nbisL1-mrna-8401, nbisL1-mrna-9360
Rhizophoraceae Rhizophora mangle 11 nbisL1-mrna-10657, nbisL1-mrna-11004, nbisL1-mrna-11261 ...
nbisL1-mrna-16773, nbisL1-mrna-17918, nbisL1-mrna-23738, nbisL1-mrna-24277, nbisL1-mrna-6478, nbisL1-mrna-7262, nbisL1-mrna-755, nbisL1-mrna-7998
Salicaceae Populus euphratica 17 populus_peu00861, populus_peu03079, populus_peu03701 ...
populus_peu10480, populus_peu12664, populus_peu17798, populus_peu17805, populus_peu25559, populus_peu26550, populus_peu28023, populus_peu28025, populus_peu28026, populus_peu28028, populus_peu29471, populus_peu33959, populus_peu34551, populus_peu37276
Solanaceae Lycium barbarum 19 gene-LOC132603797, gene-LOC132604231, gene-LOC132609764 ...
gene-LOC132609936, gene-LOC132613109, gene-LOC132617259, gene-LOC132627796, gene-LOC132632080, gene-LOC132632096, gene-LOC132635193, gene-LOC132635894, gene-LOC132636282, gene-LOC132639631, gene-LOC132640690, gene-LOC132640691, gene-LOC132640692, gene-LOC132640694, gene-LOC132640778, gene-LOC132644003
Solanaceae Solanum chilense 9 SOLCI000063300, SOLCI000499400, SOLCI001682200 ...
SOLCI002086000, SOLCI002402100, SOLCI004962000, SOLCI005681400, SOLCI005895700, SOLCI005911400
Solanaceae Solanum pennellii 11 gene-LOC107007698, gene-LOC107007716, gene-LOC107010764 ...
gene-LOC107013790, gene-LOC107022392, gene-LOC107023241, gene-LOC107024005, gene-LOC107026693, gene-LOC107026849, gene-LOC107027271, gene-LOC107028120
Tamaricaceae Reaumuria soongarica 13 STRG.10851_chr07_+, STRG.23814_chr05_+, STRG.28845_chr11_- ...
STRG.30230_chr10_+, STRG.31818_chr09_+, STRG.6247_chr04_-, STRG.8683_chr06_-, gene_14725, gene_14726, gene_16166, gene_17204, gene_3734, gene_5167
Tamaricaceae Tamarix chinensis 11 TC01G2501, TC01G3089, TC01G3709, TC02G0285, TC03G1963 ...
TC05G2566, TC06G0547, TC06G1538, TC08G0013, TC08G1361, TC09G0414
Zosteraceae Zostera marina 8 Zosma01g02330.v3.1, Zosma01g02340.v3.1, Zosma01g22480.v3.1 ...
Zosma02g05970.v3.1, Zosma05g19980.v3.1, Zosma06g19080.v3.1, Zosma06g25260.v3.1, Zosma06g26240.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.