HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ag10G02237
Species & Taxonomic ID: Apium graveolens & 4045
Genome Assembly: GCA_009905375.1
Description: BTB POZ domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 220332229 220332589 + Ag10G02237
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.76 11,593.25 Da 59.39 77.55 -0.66
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 2 50 2.40569E-6 -
Pfam PF00651 BTB/POZ domain 2 57 1.7E-8 IPR000210
SUPERFAMILY SSF54695 POZ domain 2 58 1.02E-8 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 1 91 1.1E-8 IPR011333
ProSiteProfiles PS50097 BTB domain profile. 1 51 10.757686 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_017240086.1 PREDICTED: BTB/POZ domain-containing protein At1g21780 isoform X2 [Daucus carota subsp. sativus] 0
TrEMBL A0A166I9N6 BTB domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_003553 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
Network
🔍 Co-expression Network
🔍 Protein-Protein Interaction Network
Orthology

No orthogroup found for Ag10G02237.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.