halophFGD

Basic Information

Locus ID: Ag10G02206

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	219142859	219145553	-	Ag10G02206

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.29	59,439.25 Da	45.26	89.25	-0.45

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	266	437	1.0E-24	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	219	500	7.47E-47	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	195	307	5.8E-18	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	308	510	1.1E-41	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	224	502	20.244848	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G55200.1	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain.
RefSeq	XP_017257261.1	PREDICTED: serine/threonine-protein kinase CDG1-like [Daucus carota subsp. sativus]
Swiss-Prot	Q9LV48	Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1
TrEMBL	A0A161WTV9	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_020608 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	2.255376	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	2.949646	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	2.099453	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	3.021243	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	3.331527	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	1.350124	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.569441	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.061234	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	9.685484	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	10.295311	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	9.66893	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	5.466249	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	6.862946	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	4.729056	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.735497	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	1.397853	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	5.185767	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	1.493764	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	4.405587	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	3.020465	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	1.852317	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	16.736559	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	26.072147	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	27.063463	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	20.105032	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	4.843594	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	3.991463	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	4.030223	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	7.295151	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.308068		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.699021		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.447854		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	1.815395		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	7.766346		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	2.003748		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.997708		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.436236		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.611023		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	3.848386	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	1.339325	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.333759	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.430284	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	1.202351	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	1.233168	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	2.560779	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.27254	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.915699	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	23.872955	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	59.991413	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	51.242065	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	1	jg1471
Anacardiaceae	Pistacia vera	1	pistato.v30168650
Apiaceae	Apium graveolens	4	Ag10G02206, Ag11G04546, Ag2G00801, Ag9G01854
Arecaceae	Cocos nucifera	1	scaffold000460G000040
Arecaceae	Phoenix dactylifera	1	gene-LOC103697818
Asparagaceae	Asparagus officinalis	1	AsparagusV1_Unassigned.288.V1.1
Asteraceae	Flaveria trinervia	3	Ftri15G18457, Ftri17G12801, Ftri6G19474
Casuarinaceae	Casuarina equisetifolia	1	Ceq05G0955
Casuarinaceae	Casuarina glauca	1	Cgl05G0954
Plantaginaceae	Plantago ovata	1	Pov_00000158
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_18_RagTag.210
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-28373, nbisL1-mrna-7221
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-13228
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-7688, nbisL1-mrna-7689, nbisL1-mrna-7690
Rhizophoraceae	Kandelia candel	1	evm.TU.utg000023l.272
Rhizophoraceae	Kandelia obovata	1	Maker00018787
Salicaceae	Populus euphratica	2	populus_peu04171, populus_peu12000
Solanaceae	Lycium barbarum	1	gene-LOC132644359
Solanaceae	Solanum pennellii	1	gene-LOC107025325