Basic Information
Locus ID:
Ag10G01474
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 183995103 | 183996520 | - | Ag10G01474 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 16,989.70 Da | 36.11 | 100.07 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 21 | 139 | 1.8E-16 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 13 | 138 | 3.28E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 149 | 2.9E-26 | - |
| SMART | SM00219 | tyrkin_6 | 20 | 150 | 2.2E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 150 | 15.326217 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 51 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_017227851.1 | PREDICTED: uncharacterized protein LOC108203436 [Daucus carota subsp. sativus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A166JDP6 | Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_004711 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology