halophFGD

Basic Information

Locus ID: Ag10G01387

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	180019415	180024590	-	Ag10G01387

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.00	54,442.12 Da	52.62	77.11	-0.40

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	12	229	6.4E-17	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	5	291	3.32E-72	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	335	2.7E-96	-
SMART	SM00220	serkin_6	9	279	7.0E-8	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	9	279	22.26601	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K02218 (casein kinase 1 [EC:2.7.11.1])

Pathway:

ko04011 (MAPK signaling pathway - yeast) map04011 (MAPK signaling pathway - yeast) ko04392 (Hippo signaling pathway - multiple species) map04392 (Hippo signaling pathway - multiple species)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G72710.1	casein kinase 1-like protein 2. Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.
RefSeq	XP_030971364.1	casein kinase 1-like protein 2 [Quercus lobata]
Swiss-Prot	Q9CAI5	Casein kinase 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CKL2 PE=1 SV=1
TrEMBL	A0A7N2LK87	Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0.246561	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.303722	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0.172977	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0.12239	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0.348615	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0.197127	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.177072	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0.298122	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.490065	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.631574	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	0.068174	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	0.076251	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	0.049641	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.317148	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0.10911	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.136753	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.295727	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.205109	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0.907687	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.590524	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.361968	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0.461334	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.289677	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.792777	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.213739	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.071867	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.564215	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.603833	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.161798		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.127144		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.158115		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.697159		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	0.286771		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.679658		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.495663		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0.270101		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.272918		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.208853	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.18218	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	2.179954	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.883485	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	0.318258	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	0.166862	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.924743	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	0.160611	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	0.091376	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	0.194512	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0.43881	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

No orthogroup found for Ag10G01387.