halophFGD

Basic Information

Locus ID: Ag10G01310

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	174265932	174270149	-	Ag10G01310

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.59	57,069.53 Da	61.23	86.76	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	238	394	1.7E-19	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	218	484	4.62E-47	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	211	316	1.5E-17	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	317	391	6.0E-13	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	392	496	1.4E-18	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	234	488	20.555796	IPR000719
MobiDBLite	mobidb-lite	consensus disorder prediction	100	167	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	111	133	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G56050.1	Protein kinase family protein.
RefSeq	XP_017243033.1	PREDICTED: probable inactive receptor-like protein kinase At3g56050 isoform X1 [Daucus carota subsp. sativus]
Swiss-Prot	Q9LYN6	Probable inactive receptor-like protein kinase At3g56050 OS=Arabidopsis thaliana OX=3702 GN=At3g56050 PE=2 SV=1
TrEMBL	A0A166BZF1	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_011837 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	11.143492	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	10.412906	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	14.248975	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	12.509741	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	12.545319	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	17.660353	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	11.533718	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	8.745625	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	49.413723	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	52.295425	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	41.420879	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	13.564912	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	34.105148	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	14.017435	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	96.578362	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	120.436127	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	42.312668	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	96.503555	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	92.638176	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	153.796249	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	110.288269	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	30.716919	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	31.377373	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	39.812469	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	61.564457	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	24.150877	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	25.375065	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	26.922318	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	26.148787	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	6.415194		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	7.439425		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	6.22181		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	47.57069		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	30.019665		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	83.013443		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	44.573986		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	20.475082		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	32.818806		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	5.205465	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	9.039595	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	8.918531	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	188.035797	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	191.312515	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	41.366764	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	51.58847	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	149.729858	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	67.920265	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	59.478104	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	24.401634	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	30.590813	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg14247, jg20639, jg22154, jg22155, jg24958, jg24959, jg2558 ... jg34112, jg38708
Aizoaceae	Mesembryanthemum crystallinum	4	gene_12544, gene_17023, gene_22325, gene_7073
Amaranthaceae	Atriplex hortensis	4	Ah007728, Ah017050, Ah028167, Ah035360
Amaranthaceae	Beta vulgaris	3	BVRB_6g145040, BVRB_7g175370, BVRB_8g180950
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg19175, Sbi_jg21479, Sbi_jg22337, Sbi_jg26857 ... Sbi_jg33716, Sbi_jg37589, Sbi_jg40411, Sbi_jg50403
Amaranthaceae	Salicornia europaea	4	Seu_jg16266, Seu_jg1982, Seu_jg5433, Seu_jg8404
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00003054, GOSA_00006725, GOSA_00008852, GOSA_00011550 ... GOSA_00011551
Amaranthaceae	Suaeda glauca	9	Sgl23323, Sgl28392, Sgl28432, Sgl45460, Sgl50244, Sgl62810 ... Sgl67426, Sgl73118, Sgl76666
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000007992, gene:ENSEOMG00000010228 ... gene:ENSEOMG00000019172, gene:ENSEOMG00000020097, gene:ENSEOMG00000032326, gene:ENSEOMG00000034653, gene:ENSEOMG00000041864, gene:ENSEOMG00000045188, gene:ENSEOMG00000049647
Amaranthaceae	Chenopodium quinoa	10	CQ.Regalona.r1.1BG0020230, CQ.Regalona.r1.2AG0021970 ... CQ.Regalona.r1.4AG0017890, CQ.Regalona.r1.4BG0018390, CQ.Regalona.r1.4BG0018400, CQ.Regalona.r1.4BG0022130, CQ.Regalona.r1.7AG0001550, CQ.Regalona.r1.8AG0007160, CQ.Regalona.r1.8BG0008110, CQ.Regalona.r1.9BG0004160
Anacardiaceae	Pistacia vera	3	pistato.v30061060, pistato.v30072170, pistato.v30177270
Apiaceae	Apium graveolens	7	Ag10G01310, Ag11G04841, Ag2G01830, Ag5G01438, Ag6G01071 ... Ag8G00003, Ag8G00426
Arecaceae	Cocos nucifera	6	COCNU_03G013760, COCNU_04G003510, COCNU_04G013590 ... COCNU_06G005590, COCNU_16G006290, scaffold034219G000040
Arecaceae	Phoenix dactylifera	6	gene-LOC103706722, gene-LOC103706885, gene-LOC103707329 ... gene-LOC103710344, gene-LOC103718087, gene-LOC103722780
Asparagaceae	Asparagus officinalis	5	AsparagusV1_02.285.V1.1, AsparagusV1_05.1890.V1.1 ... AsparagusV1_06.1286.V1.1, AsparagusV1_07.577.V1.1, AsparagusV1_08.3401.V1.1
Asteraceae	Flaveria trinervia	4	Ftri12G24712, Ftri14G05558, Ftri5G23668, Ftri6G16385
Brassicaceae	Arabidopsis thaliana	5	AT2G40270.1, AT3G56050.1, AT4G18640.1, AT5G45840.2 ... AT5G58540.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10000802m.g.v1.0, Thhalv10005911m.g.v1.0 ... Thhalv10013281m.g.v1.0, Thhalv10016554m.g.v1.0, Thhalv10024616m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp2g10760.v2.2, Sp4g22600.v2.2, Sp5g06490.v2.2 ... Sp6g20230.v2.2, Sp7g15380.v2.2
Brassicaceae	Brassica nigra	7	BniB01g005090.2N, BniB02g037940.2N, BniB02g062790.2N ... BniB04g011430.2N, BniB05g017700.2N, BniB06g064620.2N, BniB08g070600.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G0092, Ceq02G1275, Ceq08G1836
Casuarinaceae	Casuarina glauca	3	Cgl02G0103, Cgl02G1317, Cgl08G1894
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno02g16330, gene.Cymno02g18590, gene.Cymno04g16880 ... gene.Cymno11g09520
Hydrocharitaceae	Thalassia testudinum	5	gene.Thate01g01360, gene.Thate01g32210, gene.Thate02g35940 ... gene.Thate07g12580, gene.Thate07g18130
Malvaceae	Hibiscus hamabo Siebold & Zucc.	4	nbisL1-mrna-10914, nbisL1-mrna-3642, nbisL1-mrna-3832 ... nbisL1-mrna-618
Nitrariaceae	Nitraria sibirica	3	evm.TU.LG02.1908, evm.TU.LG09.1052, evm.TU.LG12.813
Plantaginaceae	Plantago ovata	3	Pov_00005576, Pov_00038371, Pov_00040577
Plumbaginaceae	Limonium bicolor	10	Lb0G36866, Lb1G02653, Lb1G07659, Lb2G14808, Lb2G14809 ... Lb3G16789, Lb6G32141, Lb7G33267, Lb7G33284, Lb7G33634
Poaceae	Echinochloa crus-galli	20	AH01.3972, AH02.246, AH03.4142, AH04.27, AH05.105, AH05.1421 ... AH05.2885, BH01.4367, BH02.250, BH02.2801, BH04.34, BH05.1591, BH05.2878, CH01.4606, CH02.235, CH02.3738, CH04.34, CH05.1793, CH05.2974, CH07.27
Poaceae	Eleusine coracana subsp. coracana	11	gene-QOZ80_1BG0050950, gene-QOZ80_3AG0244470 ... gene-QOZ80_3BG0283560, gene-QOZ80_5AG0363420, gene-QOZ80_5AG0376950, gene-QOZ80_5AG0378600, gene-QOZ80_5BG0411510, gene-QOZ80_5BG0424120, gene-QOZ80_5BG0425650, gene-QOZ80_9AG0672020, gene-QOZ80_9BG0695550
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.1HG0062140.1, HORVU.MOREX.r3.2HG0108450.1 ... HORVU.MOREX.r3.3HG0246580.1, HORVU.MOREX.r3.3HG0279530.1, HORVU.MOREX.r3.4HG0384390.1, HORVU.MOREX.r3.5HG0465560.1
Poaceae	Lolium multiflorum	10	gene-QYE76_008093, gene-QYE76_012966, gene-QYE76_025221 ... gene-QYE76_037229, gene-QYE76_037529, gene-QYE76_038559, gene-QYE76_051072, gene-QYE76_051073, gene-QYE76_054541, gene-QYE76_068727
Poaceae	Oryza coarctata	12	Oco01G004710, Oco01G017080, Oco02G004720, Oco02G017310 ... Oco05G010780, Oco09G007080, Oco09G016640, Oco10G007330, Oco10G016470, Oco14G017400, Oco22G000150, Ocoptg000061lG000250
Poaceae	Oryza sativa	7	LOC_Os01g10900.1, LOC_Os01g48390.2, LOC_Os03g18370.1 ... LOC_Os05g28520.1, LOC_Os05g48660.1, LOC_Os07g49240.1, LOC_Os12g01510.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G387700, gene-BS78_02G399800 ... gene-BS78_03G022700, gene-BS78_03G228600, gene-BS78_05G004400, gene-BS78_09G098600, gene-BS78_09G233300
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0102435, Pt_Chr0102466, Pt_Chr0205155, Pt_Chr0205196 ... Pt_Chr0305308, Pt_Chr0503508, Pt_Chr0602311
Poaceae	Sporobolus alterniflorus	16	Chr01G015530, Chr01G032170, Chr02G027930, Chr03G013340 ... Chr04G008840, Chr04G020740, Chr05G005670, Chr05G020780, Chr06G022410, Chr07G002830, Chr08G013520, Chr12G007450, Chr18G005710, Chr18G017130, Chr22G001480, Chr22G010910
Poaceae	Thinopyrum elongatum	5	Tel1E01G376200, Tel2E01G195300, Tel3E01G259100 ... Tel3E01G453700, Tel4E01G343600
Poaceae	Triticum dicoccoides	12	gene_TRIDC1AG033620, gene_TRIDC2AG010020 ... gene_TRIDC2BG011970, gene_TRIDC3AG017820, gene_TRIDC3AG040260, gene_TRIDC3BG024140, gene_TRIDC3BG045430, gene_TRIDC4AG015400, gene_TRIDC4BG033560, gene_TRIDC4BG061080, gene_TRIDC5AG025470, gene_TRIDC5BG026630
Poaceae	Triticum aestivum	18	TraesCS1A02G222700.1, TraesCS1B02G236000.1 ... TraesCS1D02G224300.1, TraesCS2A02G088800.1, TraesCS2B02G104200.1, TraesCS2D02G086600.1, TraesCS3A02G135400.1, TraesCS3A02G270500.1, TraesCS3B02G169200.1, TraesCS3B02G304300.2, TraesCS3D02G151400.1, TraesCS3D02G270300.1, TraesCS4A02G111600.1, TraesCS4B02G192200.1, TraesCS4D02G193500.1, TraesCS5A02G152700.1, TraesCS5B02G151400.1, TraesCS5D02G157900.1
Poaceae	Zea mays	5	Zm00001eb013610_P005, Zm00001eb120360_P003 ... Zm00001eb157010_P001, Zm00001eb295670_P002, Zm00001eb360180_P002
Poaceae	Zoysia japonica	7	nbis-gene-13683, nbis-gene-17767, nbis-gene-1949 ... nbis-gene-26064, nbis-gene-26952, nbis-gene-32622, nbis-gene-3603
Poaceae	Zoysia macrostachya	7	Zma_g10858, Zma_g1438, Zma_g18325, Zma_g27369, Zma_g27981 ... Zma_g3827, Zma_g7265
Portulacaceae	Portulaca oleracea	8	evm.TU.LG02.793, evm.TU.LG05.134, evm.TU.LG10.8 ... evm.TU.LG16.1648, evm.TU.LG18.1386, evm.TU.LG20.501, evm.TU.LG25.1180, evm.TU.LG26.16
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g37480, gene.Posoc02g03370, gene.Posoc08g10010
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_12_RagTag.798, evm.TU.Scaffold_12_RagTag.98 ... evm.TU.Scaffold_13_RagTag.298, evm.TU.Scaffold_4_RagTag.925
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-24034, nbisL1-mrna-24701, nbisL1-mrna-27412 ... nbisL1-mrna-30770
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-1120, nbisL1-mrna-15495, nbisL1-mrna-2733 ... nbisL1-mrna-5984
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-1477, nbisL1-mrna-19405, nbisL1-mrna-19941 ... nbisL1-mrna-20976
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000008l.596, evm.TU.utg000015l.183 ... evm.TU.utg000027l.153, evm.TU.utg000027l.511
Rhizophoraceae	Kandelia obovata	4	Maker00001369, Maker00006295, Maker00015959, Maker00018040
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-10602, nbisL1-mrna-1957, nbisL1-mrna-5485 ... nbisL1-mrna-5912
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-11633, nbisL1-mrna-16831, nbisL1-mrna-21966 ... nbisL1-mrna-9265
Salicaceae	Populus euphratica	7	populus_peu01730, populus_peu06583, populus_peu09933 ... populus_peu18043, populus_peu20464, populus_peu36084, populus_peu38005
Solanaceae	Lycium barbarum	4	gene-LOC132609016, gene-LOC132617793, gene-LOC132622993 ... gene-LOC132625160
Solanaceae	Solanum chilense	3	SOLCI001511700, SOLCI001614700, SOLCI003649400
Solanaceae	Solanum pennellii	4	gene-LOC107011998, gene-LOC107012036, gene-LOC107015358 ... gene-LOC107021012
Tamaricaceae	Reaumuria soongarica	4	STRG.23586_chr05_+, STRG.9588_chr03_-, gene_7746, gene_9748
Tamaricaceae	Tamarix chinensis	4	TC01G4606, TC07G0088, TC08G0430, TC11G2347
Zosteraceae	Zostera marina	5	Zosma01g10210.v3.1, Zosma01g20820.v3.1, Zosma02g21780.v3.1 ... Zosma03g36400.v3.1, Zosma04g08380.v3.1