Basic Information
Locus ID:
Ag10G00809
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 140405610 | 140406096 | - | Ag10G00809 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.21 | 5,664.21 Da | 45.83 | 62.40 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 1 | 45 | 3.6E-12 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 1 | 49 | 1.46E-11 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 50 | 7.7E-18 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 17 | 50 | 9.242867 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_042066316.1 | small ubiquitin-related modifier 2-like [Salvia splendens] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8XVM7 | Uncharacterized protein OS=Salvia splendens OX=180675 GN=SASPL_117359 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology