Basic Information
Locus ID:
Ag10G00783
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Serine threonine-protein kinase MHK-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 139154043 | 139160126 | + | Ag10G00783 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 49,863.99 Da | 44.46 | 96.61 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07830 | STKc_MAK_like | 4 | 283 | 1.08307E-172 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 283 | 2.5E-73 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 285 | 6.2E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 82 | 1.5E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 83 | 288 | 2.2E-66 | - |
| SMART | SM00220 | serkin_6 | 4 | 283 | 2.2E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 283 | 45.799118 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 121 | 133 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04115 (p53 signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13020.1 | Protein kinase superfamily protein. Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis. | 0 |
| RefSeq | XP_017237352.1 | PREDICTED: serine/threonine-protein kinase MHK [Daucus carota subsp. sativus] | 0 |
| P43294 | Serine/threonine-protein kinase MHK OS=Arabidopsis thaliana OX=3702 GN=MHK PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J5BN22 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_021714 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| PRJNA723697 | SRX10692252 | 25.666805 | Shengqin NO.2 | seed | S1-1 | S1-1 | initial formation stage (S1) |
| PRJNA723697 | SRX10692254 | 14.894002 | Shengqin NO.2 | seed | S1-3 | S1-3 | initial formation stage (S1) |
| PRJNA723697 | SRX10692255 | 13.633491 | Shengqin NO.2 | seed | S3-1 | S3-1 | middle development stage (S3) |
| PRJNA723697 | SRX10692256 | 14.658969 | Shengqin NO.2 | seed | S3-2 | S3-2 | middle development stage (S3) |
| PRJNA723697 | SRX10692257 | 13.634718 | Shengqin NO.2 | seed | S3-3 | S3-3 | middle development stage (S3) |
| PRJNA723697 | SRX10692258 | 13.779832 | Shengqin NO.2 | seed | S5-1 | S5-1 | maturation stage (S5) |
| PRJNA723697 | SRX10692259 | 9.418537 | Shengqin NO.2 | seed | S5-2 | S5-2 | maturation stage (S5) |
| PRJNA723697 | SRX10692260 | 9.979612 | Shengqin NO.2 | seed | S5-3 | S5-3 | maturation stage (S5) |
| PRJNA884666 | SRX17729272 | 16.945129 | celery | anther | W99A-r1 | male sterile line | |
| PRJNA884666 | SRX17729273 | 14.390134 | celery | anther | W99A-r2 | male sterile line | |
| PRJNA884666 | SRX17729274 | 19.526516 | celery | anther | W99A-r3 | male sterile line | |
| PRJNA884666 | SRX17729275 | 19.182737 | celery | anther | W99B-r1 | maintainer line | |
| PRJNA884666 | SRX17729276 | 18.803482 | celery | anther | W99B-r2 | maintainer line | |
| PRJNA884666 | SRX17729277 | 15.512527 | celery | anther | W99B-r3 | maintainer line | |
| PRJNA884180 | SRX17743889 | 16.320347 | var. secalinum Yablochny | collenchyma | Col_S1_rep1-1 | ||
| PRJNA884180 | SRX17748056 | 15.575417 | var. secalinum Yablochny | collenchyma | Col_S1_rep3 | biological replicate 3 | |
| PRJNA884180 | SRX17748057 | 18.618832 | var. secalinum Yablochny | collenchyma | Col_S1_rep4 | biological replicate 4 | |
| PRJNA884180 | SRX17748678 | 17.940306 | var. secalinum Yablochny | parenchyma | Par_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748679 | 11.095239 | var. secalinum Yablochny | parenchyma | Par_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748680 | 14.795414 | var. secalinum Yablochny | parenchyma | Par_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748681 | 19.513935 | var. secalinum Yablochny | parenchyma | Par_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17748898 | 27.872004 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17748899 | 26.725042 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17748900 | 27.093607 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17748901 | 23.273584 | var. secalinum Yablochny | vascular bundle | Vas_S1_rep4 | Biological replicate 4 | |
| PRJNA884180 | SRX17749129 | 19.417393 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep1 | Biological replicate 1 | |
| PRJNA884180 | SRX17749130 | 15.788799 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep2 | Biological replicate 2 | |
| PRJNA884180 | SRX17749131 | 14.554096 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep3 | Biological replicate 3 | |
| PRJNA884180 | SRX17749132 | 17.094616 | var. secalinum Yablochny | part of the celery petiole without collenchyma strands | Collenchyma-free_S1_rep4 | Biological replicate 4 | |
| PRJNA1124269 | SRX24936411 | 9.262855 | leaf | CK1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936412 | 6.16658 | leaf | CK2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936413 | 5.813453 | leaf | CK3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936414 | 11.237761 | leaf | D1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936415 | 20.172674 | leaf | D2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936416 | 14.957355 | leaf | D3 | replicate=biological replicate3 | ||
| PRJNA1124269 | SRX24936417 | 10.343625 | leaf | MD1 | replicate=biological replicate1 | ||
| PRJNA1124269 | SRX24936418 | 5.10776 | leaf | MD2 | replicate=biological replicate2 | ||
| PRJNA1124269 | SRX24936419 | 8.238998 | leaf | MD3 | replicate=biological replicate3 | ||
| PRJNA387092 | SRX2833309 | 11.859916 | shanghaihuangxin | leaf | leaves between 0.5 and 1 cm in breadth, folded; | stage 2 | |
| PRJNA387092 | SRX2833321 | 12.25362 | shanghaihuangxin | leaf | leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion | stage 5 | |
| PRJNA387092 | SRX2833323 | 7.384788 | shanghaihuangxin | leaf | leaves >3 cm, unfolded, with clearstem extension | stage 7 | |
| PRJNA543957 | SRX5879598 | 8.001453 | Zhangzhou lvqing | stem | Se3 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879599 | 21.300362 | Zhangzhou lvqing | stem | Se2 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879600 | 24.493416 | Zhangzhou lvqing | stem | Mock2 | mock | |
| PRJNA543957 | SRX5879601 | 26.681295 | Zhangzhou lvqing | stem | Mock1 | mock | |
| PRJNA543957 | SRX5879602 | 9.243358 | Zhangzhou lvqing | stem | Se1 | 100 ppm Na2SeO4 | |
| PRJNA543957 | SRX5879603 | 23.684271 | Zhangzhou lvqing | stem | Mock3 | mock | |
| PRJNA609149 | SRX7815917 | 18.04574 | Jinnan Shiqin | flower bud | early flower bud | early flower bud | |
| PRJNA609149 | SRX7815918 | 21.848602 | Jinnan Shiqin | flower bud | middle flower bud | middle flower bud | |
| PRJNA609149 | SRX7815919 | 22.911928 | Jinnan Shiqin | flower bud | early flowering period | early flowering period |
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg36094 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5413 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028362 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_5g112200, BVRB_8g188110 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg33952 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15131 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011858 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73908, Sgl77416 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000008269, gene:ENSEOMG00000034416 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0009610, CQ.Regalona.r1.7BG0011790 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30014000 |
| Apiaceae | Apium graveolens | 1 | Ag10G00783 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G008400, COCNU_11G002880 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709401 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1067.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G31285 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G13020.3 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g32320.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g067770.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1557 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1587 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g01200 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g21960 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1628 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb2G13536, Lb4G23904, Lb4G23906 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.566, BH01.165, CH01.11 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208480, gene-QOZ80_3BG0253530 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0533360.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_059913, gene-QYE76_060129 |
| Poaceae | Oryza coarctata | 2 | Oco05G028790, Oco06G029830 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g63020.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G012300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106449, Pt_Chr0307384 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G000570, Chr04G032430, Chr07G031480, Chr12G032000 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G831800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG051000, gene_TRIDC5BG079810 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G336800.2, TraesCS5B02G536500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb064400_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-15638, nbis-gene-16738 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2376, Zma_g70 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1074, evm.TU.LG12.658 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g03950 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.1528 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-20698, nbisL1-mrna-20792 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1942 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-21515 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.963 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009411 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13949 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4559 |
| Salicaceae | Populus euphratica | 1 | populus_peu30869 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132606999 |
| Solanaceae | Solanum chilense | 1 | SOLCI000391500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107023747 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7190 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G0719 |
| Zosteraceae | Zostera marina | 1 | Zosma04g01410.v3.1 |