halophFGD

Basic Information

Locus ID: Ag10G00760

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: f-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	136454668	136458181	-	Ag10G00760

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.75	35,284.76 Da	50.52	84.43	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_017240183.1	PREDICTED: probable F-box protein At1g65740 [Daucus carota subsp. sativus]	0
TrEMBL	A0A169WHM7	DUF295 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_012644 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	0	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	0.117207	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	0	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	0	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	0	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	0	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	0.097861	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	0.236692	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	0	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	0.218476	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	0.188345	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	0.807567	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	0.787298	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	0.737999	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	0.851763	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	0	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	0.448037	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0.1525	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.034963	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	0.119659	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	0.563422	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	0.391891	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	0.076229	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	0.350042	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.918971	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	0.380818	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.080186	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	0.361504	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	0.083645		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	0.328223		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	0.393788		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	0.234066		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	0.404729		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	0.445491		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	0.936597		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	0		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	0.67222		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	0	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	0.211176	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	0.350761	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	0.282211	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	0.304824	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	5.488256	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	11.332135	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	0.299071	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	2.278636	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	0	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	0.216813	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	0	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000029071
Apiaceae	Apium graveolens	1	Ag10G00760
Poaceae	Echinochloa crus-galli	14	AH01.4084, AH02.1851, AH02.1852, AH05.3002, AH07.2695 ... BH02.1888, BH05.3052, BH07.2521, BH07.2522, BH09.1446, BH09.1447, CH05.3070, CH07.2583, CH09.1557
Poaceae	Eleusine coracana subsp. coracana	14	gene-QOZ80_1AG0036900, gene-QOZ80_1BG0086930 ... gene-QOZ80_4AG0313820, gene-QOZ80_4AG0313860, gene-QOZ80_4AG0313900, gene-QOZ80_4BG0344960, gene-QOZ80_4BG0344970, gene-QOZ80_4BG0344980, gene-QOZ80_4BG0345040, gene-QOZ80_4BG0345060, gene-QOZ80_5AG0366350, gene-QOZ80_5BG0414130, gene-QOZ80_5BG0414140, gene-QOZ80_8BG0662360
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.2HG0107280.1.CDS1 ... HORVU.MOREX.r3.2HG0107320.1.CDS1, HORVU.MOREX.r3.2HG0107350.1.CDS1, HORVU.MOREX.r3.2HG0174820.1.CDS1, HORVU.MOREX.r3.3HG0221070.1.CDS1
Poaceae	Lolium multiflorum	8	gene-QYE76_009182, gene-QYE76_019489, gene-QYE76_026177 ... gene-QYE76_026790, gene-QYE76_026847, gene-QYE76_028626, gene-QYE76_028758, gene-QYE76_044666
Poaceae	Oryza coarctata	8	Oco07G008360, Oco07G008480, Oco08G008260, Oco14G006340 ... Oco15G001090, Oco15G001100, Oco16G001230, Oco16G001240
Poaceae	Oryza sativa	5	LOC_Os04g39660.1, LOC_Os07g23890.1, LOC_Os08g03300.1 ... LOC_Os08g03320.1, LOC_Os08g03330.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G420300, gene-BS78_06G131300, gene-BS78_K005000 ... gene-BS78_06G132900
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0200459, Pt_Chr0200460, Pt_Chr0200473, Pt_Chr0302381 ... Pt_Chr0302382, Pt_Chr0404403, Pt_Chr0404406
Poaceae	Sporobolus alterniflorus	14	Chr02G007040, Chr0G009410, Chr11G023100, Chr13G006840 ... Chr18G013930, Chr22G003650, Chr23G010790, Chr23G010800, Chr23G010810, Chr25G008950, Chr26G008910, Chr26G008920, Chr26G008960, Chr30G008830
Poaceae	Thinopyrum elongatum	3	Tel2E01G582500, Tel2E01G583000, Tel4E01G012600
Poaceae	Triticum dicoccoides	3	gene_TRIDC2AG048650, gene_TRIDC2BG051310 ... gene_TRIDC4BG001430
Poaceae	Triticum aestivum	16	TraesCS2A02G078500.1.cds1, TraesCS2A02G078600.1.cds1 ... TraesCS2A02G329500.1.cds1, TraesCS2A02G329600.1.cds1, TraesCS2A02G329900.1.cds1, TraesCS2B02G093700.1.cds1, TraesCS2B02G352400.1.cds1, TraesCS2B02G352800.1.cds1, TraesCS2D02G332800.1.cds1, TraesCS2D02G333200.1.cds1, TraesCS3B02G606000.1, TraesCS4A02G310900.1.cds1, TraesCS4A02G311500.1.cds1, TraesCS4D02G002600.1.cds1, TraesCS5A02G054600.1.cds1, TraesCSU02G054900.1
Poaceae	Zea mays	4	Zm00001eb031200_P001, Zm00001eb061950_P001 ... Zm00001eb079930_P001, Zm00001eb424780_P001
Poaceae	Zoysia japonica	3	nbis-gene-25133, nbis-gene-54288, nbis-gene-7419
Poaceae	Zoysia macrostachya	2	Zma_g21451, Zma_g28599