Basic Information
Locus ID:
Ag10G00497
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
B3 domain-containing
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 105529581 | 105531037 | - | Ag10G00497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 37,276.02 Da | 26.84 | 87.47 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 4 | 99 | 2.75E-10 | IPR015300 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 228 | 315 | 9.42E-8 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 221 | 320 | 4.2E-5 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 2 | 99 | 1.1E-5 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017221326.1 | PREDICTED: uncharacterized protein LOC108198056 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A166EB65 | TF-B3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_007163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |