halophFGD

Basic Information

Locus ID: Ag10G00425

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	98365959	98371221	-	Ag10G00425

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.13	56,805.05 Da	48.13	76.17	-0.43

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	79	314	4.4E-25	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	45	324	3.93E-46	IPR011009
SUPERFAMILY	SSF48452	TPR-like	393	494	5.6E-13	IPR011990
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	41	140	1.0E-28	-
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	390	500	2.8E-13	IPR011990
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	142	332	2.6E-45	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	65	320	21.149424	IPR000719
MobiDBLite	mobidb-lite	consensus disorder prediction	1	32	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K14500 (BR-signaling kinase [EC:2.7.11.1])

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G35230.1	BR-signaling kinase 1. Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.
RefSeq	XP_017247586.1	PREDICTED: probable serine/threonine-protein kinase At4g35230 [Daucus carota subsp. sativus]
Swiss-Prot	Q944A7	Serine/threonine-protein kinase BSK1 OS=Arabidopsis thaliana OX=3702 GN=BSK1 PE=1 SV=1
TrEMBL	A0A165A5S7	Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_015675 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	25.959949	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	20.924681	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	24.448786	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	25.527752	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	24.864601	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	22.14381	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	22.855249	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	18.224092	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	32.944721	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	29.573654	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	32.435703	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	28.33523	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	28.447577	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	26.026419	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	19.618422	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	19.197384	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	19.159393	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	29.166368	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	19.729921	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	31.23107	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	30.392014	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	24.562805	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	25.043447	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	25.688553	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	24.947226	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	22.545086	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	25.15811	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	24.040264	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	24.37739	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	19.229628		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	18.538063		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	15.934023		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	31.354076		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	22.28303		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	29.273008		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	28.96612		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	16.780827		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	22.062281		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	23.201571	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	22.948996	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	20.374796	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	54.572826	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	52.353237	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	49.305241	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	43.693989	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	50.357426	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	33.899445	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	26.340475	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	26.195423	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	31.871828	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg11660, jg23038, jg836
Aizoaceae	Mesembryanthemum crystallinum	2	gene_26354, gene_8662
Amaranthaceae	Atriplex hortensis	2	Ah009574, Ah035966
Amaranthaceae	Beta vulgaris	1	BVRB_9g212860
Amaranthaceae	Salicornia bigelovii	3	Sbi_jg10983, Sbi_jg39895, Sbi_jg47342
Amaranthaceae	Salicornia europaea	2	Seu_jg14428, Seu_jg21616
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00014195, GOSA_00018793
Amaranthaceae	Suaeda glauca	6	Sgl12043, Sgl12243, Sgl17336, Sgl17472, Sgl55566, Sgl60784
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000011547, gene:ENSEOMG00000014884 ... gene:ENSEOMG00000019707, gene:ENSEOMG00000036747, gene:ENSEOMG00000039939, gene:ENSEOMG00000046193, gene:ENSEOMG00000049182
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0022600, CQ.Regalona.r1.1BG0001570 ... CQ.Regalona.r1.7BG0002070, CQ.Regalona.r1.9AG0022700
Anacardiaceae	Pistacia vera	2	pistato.v30048570, pistato.v30109000
Apiaceae	Apium graveolens	2	Ag10G00425, AgUnG00632
Arecaceae	Cocos nucifera	2	COCNU_07G014700, COCNU_07G014710
Arecaceae	Phoenix dactylifera	1	gene-LOC103708708
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.2405.V1.1, AsparagusV1_07.2249.V1.1
Asteraceae	Flaveria trinervia	2	Ftri17G27832, Ftri5G09139
Brassicaceae	Arabidopsis thaliana	2	AT1G50990.1, AT4G35230.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10010042m.g.v1.0, Thhalv10018415m.g.v1.0 ... Thhalv10024929m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp5g22710.v2.2, Sp7g33000.v2.2
Brassicaceae	Brassica nigra	4	BniB03g021210.2N, BniB03g044950.2N, BniB05g003150.2N ... BniB05g003170.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq03G0767, Ceq03G0769, Ceq07G1849
Casuarinaceae	Casuarina glauca	3	Cgl03G0862, Cgl03G0864, Cgl07G2024
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g09880, gene.Cymno10g03670
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate01g19590, gene.Thate08g20230
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-5306
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG06.113
Plantaginaceae	Plantago ovata	4	Pov_00001772, Pov_00020478, Pov_00020553, Pov_00036941
Plumbaginaceae	Limonium bicolor	3	Lb1G02824, Lb1G05728, Lb3G19323
Poaceae	Echinochloa crus-galli	6	AH01.3045, AH01.5203, BH01.3387, BH01.5007, CH01.3630 ... CH01.5607
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0115350, gene-QOZ80_2BG0169140 ... gene-QOZ80_3AG0232620, gene-QOZ80_3BG0295330
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0054940.1, HORVU.MOREX.r3.4HG0409600.1
Poaceae	Lolium multiflorum	3	gene-QYE76_012339, gene-QYE76_012445, gene-QYE76_071119
Poaceae	Oryza coarctata	4	Oco05G002030, Oco06G002000, Oco19G009210, Oco20G009090
Poaceae	Oryza sativa	2	LOC_Os03g04050.1, LOC_Os10g39670.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G298300, gene-BS78_01G492200
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0503084
Poaceae	Sporobolus alterniflorus	8	Chr01G038150, Chr04G005210, Chr06G028520, Chr07G006350 ... Chr09G004030, Chr12G001430, Chr13G020950, Chr15G019740
Poaceae	Thinopyrum elongatum	2	Tel1E01G351200, Tel4E01G539400
Poaceae	Triticum dicoccoides	4	gene_TRIDC1AG030750, gene_TRIDC1BG036260 ... gene_TRIDC4BG055020, gene_TRIDC5AG071150
Poaceae	Triticum aestivum	6	TraesCS1A02G203400.1, TraesCS1B02G217500.1 ... TraesCS1D02G206900.1, TraesCS4B02G328200.1, TraesCS4D02G325200.1, TraesCS5A02G500000.1
Poaceae	Zea mays	3	Zm00001eb002610_P003, Zm00001eb022440_P002 ... Zm00001eb402560_P001
Poaceae	Zoysia japonica	2	nbis-gene-3011, nbis-gene-36216
Poaceae	Zoysia macrostachya	3	Zma_g12830, Zma_g2140, Zma_g4485
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.291, evm.TU.LG02.480, evm.TU.LG03.529 ... evm.TU.LG04.462, evm.TU.LG09.1725, evm.TU.LG12.1192
Posidoniaceae	Posidonia oceanica	2	gene.Posoc02g12750, gene.Posoc06g07460
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_1_RagTag.2368, evm.TU.Scaffold_2_RagTag.39 ... evm.TU.Scaffold_7_RagTag.396
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-29, nbisL1-mrna-43, nbisL1-mrna-5193
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-6216, nbisL1-mrna-6304, nbisL1-mrna-8284
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-3205, nbisL1-mrna-6902, nbisL1-mrna-9307
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000002l.815, evm.TU.utg000009l.1215 ... evm.TU.utg000016l.29
Rhizophoraceae	Kandelia obovata	3	Maker00005558, Maker00010775, Maker00017020
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-14088, nbisL1-mrna-4587, nbisL1-mrna-8776
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-20093, nbisL1-mrna-22500, nbisL1-mrna-24130
Salicaceae	Populus euphratica	5	populus_peu08620, populus_peu08621, populus_peu15453 ... populus_peu33096, populus_peu36721
Solanaceae	Lycium barbarum	1	gene-LOC132628188
Solanaceae	Solanum chilense	1	SOLCI006961100
Solanaceae	Solanum pennellii	1	gene-LOC107017214
Tamaricaceae	Reaumuria soongarica	2	STRG.31414_chr11_-, gene_8836
Tamaricaceae	Tamarix chinensis	3	TC04G2468, TC10G0220, TC12G0819
Zosteraceae	Zostera marina	3	Zosma01g10900.v3.1, Zosma03g26370.v3.1, Zosma05g31900.v3.1