Basic Information
Locus ID:
Ag10G00367
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 90438735 | 90440188 | - | Ag10G00367 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 33,404.99 Da | 23.69 | 91.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 230 | 284 | 4.01667E-7 | IPR003340 |
| Pfam | PF02362 | B3 DNA binding domain | 230 | 284 | 2.9E-7 | IPR003340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 230 | 282 | 4.51E-9 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 178 | 287 | 3.5E-9 | IPR015300 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 232 | 286 | 9.375326 | IPR003340 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_017233687.1 | PREDICTED: uncharacterized protein LOC108207768 [Daucus carota subsp. sativus] | 0 |
| TrEMBL | A0A169WUM1 | TF-B3 domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_002555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 54 | Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... |