Basic Information
Locus ID:
Ag10G00104
Species & Taxonomic ID:
Apium graveolens & 4045
Genome Assembly:
GCA_009905375.1
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 34718923 | 34719936 | - | Ag10G00104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.25 | 23,592.41 Da | 65.52 | 67.98 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 27 | 103 | 1.1E-14 | IPR008913 |
| SUPERFAMILY | SSF57850 | RING/U-box | 154 | 195 | 2.59E-5 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 94 | 149 | 3.92E-16 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 18 | 84 | 7.72E-15 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 195 | 1.4E-5 | IPR013083 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 93 | 156 | 25.558725 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 20 | 90 | 20.642708 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G74770.2 | - | 0 |
| RefSeq | XP_017219414.1 | PREDICTED: uncharacterized protein LOC108196583 [Daucus carota subsp. sativus] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | F6GTB7 | Zinc finger protein BRUTUS-like At1g18910 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g05480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|
Orthology