halophFGD

Basic Information

Locus ID: Ag10G00036

Species & Taxonomic ID: Apium graveolens & 4045

Genome Assembly: GCA_009905375.1

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	9353607	9354048	+	Ag10G00036

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.45	7,337.49 Da	9.07	95.62	0.04

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

Best hit

Source	Best Hit ID	Description	E-value

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
PRJNA723697	SRX10692252	2.128401	Shengqin NO.2	seed	S1-1	S1-1	initial formation stage (S1)
PRJNA723697	SRX10692254	2.712268	Shengqin NO.2	seed	S1-3	S1-3	initial formation stage (S1)
PRJNA723697	SRX10692255	5.038292	Shengqin NO.2	seed	S3-1	S3-1	middle development stage (S3)
PRJNA723697	SRX10692256	1.432701	Shengqin NO.2	seed	S3-2	S3-2	middle development stage (S3)
PRJNA723697	SRX10692257	1.587298	Shengqin NO.2	seed	S3-3	S3-3	middle development stage (S3)
PRJNA723697	SRX10692258	4.365292	Shengqin NO.2	seed	S5-1	S5-1	maturation stage (S5)
PRJNA723697	SRX10692259	2.209379	Shengqin NO.2	seed	S5-2	S5-2	maturation stage (S5)
PRJNA723697	SRX10692260	1.662071	Shengqin NO.2	seed	S5-3	S5-3	maturation stage (S5)
PRJNA884666	SRX17729272	7.887277	celery	anther		W99A-r1	male sterile lineÂ
PRJNA884666	SRX17729273	8.021885	celery	anther		W99A-r2	male sterile lineÂ
PRJNA884666	SRX17729274	8.045629	celery	anther		W99A-r3	male sterile lineÂ
PRJNA884666	SRX17729275	7.753325	celery	anther		W99B-r1	maintainer line
PRJNA884666	SRX17729276	6.874235	celery	anther		W99B-r2	maintainer line
PRJNA884666	SRX17729277	7.102077	celery	anther		W99B-r3	maintainer line
PRJNA884180	SRX17743889	1.405594	var. secalinum Yablochny	collenchyma		Col_S1_rep1-1
PRJNA884180	SRX17748056	1.782945	var. secalinum Yablochny	collenchyma		Col_S1_rep3	biological replicate 3
PRJNA884180	SRX17748057	1.49502	var. secalinum Yablochny	collenchyma		Col_S1_rep4	biological replicate 4
PRJNA884180	SRX17748678	0	var. secalinum Yablochny	parenchyma		Par_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748679	0.758847	var. secalinum Yablochny	parenchyma		Par_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748680	1.876483	var. secalinum Yablochny	parenchyma		Par_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748681	5.004909	var. secalinum Yablochny	parenchyma		Par_S1_rep4	Biological replicate 4
PRJNA884180	SRX17748898	2.334785	var. secalinum Yablochny	vascular bundle		Vas_S1_rep1	Biological replicate 1
PRJNA884180	SRX17748899	4.541056	var. secalinum Yablochny	vascular bundle		Vas_S1_rep2	Biological replicate 2
PRJNA884180	SRX17748900	2.211001	var. secalinum Yablochny	vascular bundle		Vas_S1_rep3	Biological replicate 3
PRJNA884180	SRX17748901	0.991929	var. secalinum Yablochny	vascular bundle		Vas_S1_rep4	Biological replicate 4
PRJNA884180	SRX17749129	5.248153	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep1	Biological replicate 1
PRJNA884180	SRX17749130	0.798227	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep2	Biological replicate 2
PRJNA884180	SRX17749131	0.503474	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep3	Biological replicate 3
PRJNA884180	SRX17749132	1.932834	var. secalinum Yablochny	part of the celery petiole without collenchyma strands		Collenchyma-free_S1_rep4	Biological replicate 4
PRJNA1124269	SRX24936411	6.382553		leaf		CK1	replicate=biological replicate1
PRJNA1124269	SRX24936412	13.275015		leaf		CK2	replicate=biological replicate2
PRJNA1124269	SRX24936413	15.596452		leaf		CK3	replicate=biological replicate3
PRJNA1124269	SRX24936414	27.359188		leaf		D1	replicate=biological replicate1
PRJNA1124269	SRX24936415	11.568671		leaf		D2	replicate=biological replicate2
PRJNA1124269	SRX24936416	23.922756		leaf		D3	replicate=biological replicate3
PRJNA1124269	SRX24936417	12.719222		leaf		MD1	replicate=biological replicate1
PRJNA1124269	SRX24936418	8.289148		leaf		MD2	replicate=biological replicate2
PRJNA1124269	SRX24936419	7.932231		leaf		MD3	replicate=biological replicate3
PRJNA387092	SRX2833309	4.319814	shanghaihuangxin	leaf	leaves between 0.5 and 1 cm in breadth, folded;	stage 2
PRJNA387092	SRX2833321	5.061597	shanghaihuangxin	leaf	leaves between 2and 2.5 cm in breadth, nearly unfolded, with clear stem exten-sion	stage 5
PRJNA387092	SRX2833323	3.799453	shanghaihuangxin	leaf	leaves >3 cm, unfolded, with clearstem extension	stage 7
PRJNA543957	SRX5879598	3.99527	Zhangzhou lvqing	stem		Se3	100 ppm Na2SeO4
PRJNA543957	SRX5879599	4.646382	Zhangzhou lvqing	stem		Se2	100 ppm Na2SeO4
PRJNA543957	SRX5879600	18.027784	Zhangzhou lvqing	stem		Mock2	mock
PRJNA543957	SRX5879601	12.812314	Zhangzhou lvqing	stem		Mock1	mock
PRJNA543957	SRX5879602	2.380472	Zhangzhou lvqing	stem		Se1	100 ppm Na2SeO4
PRJNA543957	SRX5879603	5.125231	Zhangzhou lvqing	stem		Mock3	mock
PRJNA609149	SRX7815917	2.088393	Jinnan Shiqin	flower bud	early flower bud	early flower bud
PRJNA609149	SRX7815918	1.302396	Jinnan Shiqin	flower bud	middle flower bud	middle flower bud
PRJNA609149	SRX7815919	2.38941	Jinnan Shiqin	flower bud	early flowering period	early flowering period

Network

🔍 Co-expression Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	54	Ag10G00036, Ag10G00367, Ag10G00397, Ag10G00497, Ag10G00882 ... Ag10G01468, Ag10G02245, Ag10G02571, Ag11G03125, Ag11G03221, Ag11G03736, Ag11G04345, Ag1G00421, Ag1G01521, Ag2G00028, Ag2G01815, Ag2G01816, Ag2G01884, Ag2G02830, Ag3G01321, Ag3G01912, Ag4G00031, Ag4G00961, Ag4G01758, Ag4G02255, Ag4G02624, Ag5G00349, Ag5G00350, Ag5G00351, Ag5G00354, Ag5G01411, Ag5G02348, Ag5G02349, Ag6G00668, Ag6G01935, Ag6G02292, Ag6G02359, Ag6G02503, Ag7G00385, Ag7G01462, Ag7G01879, Ag8G00346, Ag8G00534, Ag8G00941, Ag8G02087, Ag9G00316, Ag9G00814, Ag9G01964, Ag9G02056, Ag9G02345, AgUnG00453, AgUnG00938, AgUnG01552, AgUnG01567