Basic Information
Locus ID:
AH09.801
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 19841298 | 19850044 | + | AH09.801 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 125,383.64 Da | 50.75 | 85.05 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 23 | 63 | 2.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 74 | 8.63E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 22 | 60 | 2.6E-7 | - |
| SMART | SM00256 | fbox_2 | 24 | 64 | 1.6E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 808 | 1016 | 3.0E-11 | IPR017451 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 110 | 314 | 7.8E-20 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 64 | 9.470975 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 534 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012700658.1 | putative F-box protein At2g02030 [Setaria italica] | 2.49E-126 |
| TrEMBL | A0A368PM62 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_1G197800v2 PE=4 SV=1 | 5.63E-125 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology