Basic Information
Locus ID:
AH09.788
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 19662485 | 19676943 | + | AH09.788 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 295,526.59 Da | 55.52 | 70.36 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 1311 | 1376 | 1.1E-12 | IPR025312 |
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 2511 | 2568 | 7.0E-5 | IPR003653 |
| Pfam | PF13963 | Transposase-associated domain | 396 | 469 | 5.4E-18 | IPR029480 |
| Pfam | PF02992 | Transposase family tnp2 | 713 | 926 | 1.5E-90 | IPR004242 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 1087 | 1193 | 7.8E-37 | IPR025452 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2419 | 2583 | 6.08E-19 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 2405 | 2590 | 1.6E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1474 | 1504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2169 | 2214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2312 | 2345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1378 | 1399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1996 | 2017 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1470 | 1504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1639 | 1670 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2233 | 2281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1559 | 1583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1556 | 1586 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2147 | 2285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1996 | 2019 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 200 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1640 | 1660 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 278 | - | - |
| Coils | Coil | Coil | 1947 | 1981 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| TrEMBL | Q2QQL4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g30630 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |