HalophFGD

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Basic Information
Locus ID: AH09.608
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
AH09 16384146 16384403 + AH09.608
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.18 9,266.70 Da 38.32 95.29 0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 19 50 6.6E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 13 54 3.27E-7 IPR036047
Gene3D G3DSA:1.20.1280.50 - 9 78 9.5E-7 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039834316.1 F-box protein At2g40910-like [Panicum virgatum] 4.07E-9
TrEMBL A0A835B4Q4 F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_042913 PE=4 SV=1 1.17E-14
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_1829
Poaceae Echinochloa crus-galli 4 AH03.2798, AH03.434, AH09.608, BH01.2241
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.