Basic Information
Locus ID:
AH09.58
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 913587 | 915866 | + | AH09.58 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 81,337.27 Da | 38.57 | 82.61 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 25 | 214 | 2.633E-110 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 38 | 193 | 7.2E-13 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 196 | 698 | 1.8E-235 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 275 | 530 | 6.37E-109 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 554 | 676 | 9.55E-39 | IPR037196 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 15 | 225 | 1.14E-73 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 530 | 681 | 2.1E-65 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 443 | 529 | 2.2E-42 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 274 | 442 | 3.5E-85 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 13 | 240 | 3.1E-95 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 38 | 194 | 7.9E-7 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 2 | 713 | 4.6E-262 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 36 | 45 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 130 | 152 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 200 | 218 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 37 | 59 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 104 | 121 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 182 | 199 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 16 | 36 | 3.0E-83 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 103 | 3.0E-83 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 13 | 677 | 27.265911 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 688 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 260 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_025825320.1 | heat shock protein 82 [Panicum hallii] | 0 |
| Q08277 | Heat shock protein 82 OS=Zea mays OX=4577 GN=HSP82 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2T8IAJ7 | HATPase_c domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G009900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology