Basic Information
Locus ID:
AH09.573
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 15748553 | 15750623 | - | AH09.573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 69,791.45 Da | 55.45 | 82.97 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 293 | 488 | 6.02E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 73 | 121 | 2.09E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 269 | 538 | 1.2E-5 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 63 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 9.12E-6 |
| RefSeq | XP_039818532.1 | uncharacterized protein LOC120681046 [Panicum virgatum] | 1.03E-78 |
| TrEMBL | A0A2T7CTE0 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G095400 PE=4 SV=1 | 2.32E-246 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology