Basic Information
Locus ID:
AH09.2788
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 38364487 | 38368152 | - | AH09.2788 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.86 | 41,711.06 Da | 48.99 | 82.77 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55021 | ACT-like | 193 | 260 | 1.42E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 347 | 6.43E-6 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 364 | 3.1E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 376 | 8.782174 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 195 | 271 | 12.2068 | IPR002912 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17700.1 | ACT-like protein tyrosine kinase family protein. | 1.37E-57 |
| RefSeq | XP_012700130.1 | serine/threonine-protein kinase STY8 isoform X2 [Setaria italica] | 1.62E-189 |
| O22558 | Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2 | 1.34E-56 | |
| TrEMBL | K3ZE75 | Serine/threonine-protein kinase STY8 OS=Setaria italica OX=4555 GN=101769300 PE=4 SV=1 | 4.07E-188 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000031909 |
| Apiaceae | Apium graveolens | 1 | Ag6G01205 |
| Poaceae | Echinochloa crus-galli | 1 | AH09.2788 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_8AG0614330, gene-QOZ80_8AG0620210 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0707420.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_033663 |
| Poaceae | Oryza coarctata | 2 | Oco08G019120, Oco16G000210 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g01280.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr29G010120 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G995900, Tel7E01G559600 |
| Poaceae | Triticum aestivum | 1 | TraesCS7B02G227300.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38488, nbis-gene-38901 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22605 |