Basic Information
Locus ID:
AH09.2557
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 36618180 | 36619611 | + | AH09.2557 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 49,271.93 Da | 49.03 | 78.90 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 378 | 7.7E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 379 | 1.26E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 384 | 7.9E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 169 | 1.7E-26 | - |
| SMART | SM00220 | serkin_6 | 93 | 378 | 1.6E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 392 | 35.45303 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 224 | 236 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 121 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 446 | - | - |
| Coils | Coil | Coil | 33 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 5.07E-76 |
| RefSeq | XP_004960130.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Setaria italica] | 4.13E-238 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 4.96E-75 | |
| TrEMBL | A0A368QAR7 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_3G021400v2 PE=3 SV=1 | 9.35E-237 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology