HalophFGD

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Basic Information
Locus ID: AH09.2381
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: SNF2 family N-terminal domain
Maps and Mapping Data
Chromosome Start End Strand ID
AH09 34956696 34958841 - AH09.2381
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.54 32,668.31 Da 42.39 62.68 -0.68
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 152 193 - -
MobiDBLite mobidb-lite consensus disorder prediction 174 189 - -
KEGG Pathway
KO Term:
K15083 (DNA repair protein RAD16)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G50410.1 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related. 5.95E-6
RefSeq XP_039818778.1 helicase-like transcription factor CHR28 [Panicum virgatum] 2.77E-40
TrEMBL A0A2T7D0E6 SNF2-rel_dom domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G293900 PE=4 SV=1 9.1E-43
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH09.2381, BH09.2589, CH09.2819
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.