Basic Information
Locus ID:
AH09.2300
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 33994282 | 34022292 | - | AH09.2300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 112,992.37 Da | 40.58 | 87.66 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 707 | 969 | 6.02768E-104 | - |
| Pfam | PF00069 | Protein kinase domain | 702 | 962 | 7.8E-48 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 426 | 621 | 3.8E-40 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 178 | 389 | 3.32E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 969 | 4.18E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 776 | 2.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 173 | 280 | 2.1E-26 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 423 | 627 | 3.4E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 281 | 415 | 1.2E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 978 | 6.2E-60 | - |
| SMART | SM00220 | serkin_6 | 701 | 969 | 3.9E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 975 | 39.212677 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 729 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1007 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1020 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 2.68E-219 |
| RefSeq | XP_022684058.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X7 [Setaria italica] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 9.63E-217 | |
| TrEMBL | K3Y537 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_7G237600v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology