Basic Information
Locus ID:
AH09.2299
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 33978597 | 33992197 | - | AH09.2299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 145,184.84 Da | 36.28 | 88.98 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 701 | 981 | 3.64553E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 699 | 976 | 4.0E-45 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 428 | 613 | 5.5E-43 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 96 | 386 | 7.99E-50 | - |
| SUPERFAMILY | SSF48452 | TPR-like | 1077 | 1192 | 1.52E-21 | IPR011990 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 979 | 2.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 278 | 2.9E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 771 | 997 | 3.0E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 415 | 2.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 770 | 5.9E-36 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1077 | 1204 | 1.3E-23 | IPR011990 |
| Gene3D | G3DSA:2.60.120.430 | - | 424 | 616 | 1.4E-33 | - |
| SMART | SM00220 | serkin_6 | 695 | 979 | 4.1E-35 | IPR000719 |
| SMART | SM00028 | tpr_5 | 1075 | 1108 | 26.0 | IPR019734 |
| SMART | SM00028 | tpr_5 | 1146 | 1179 | 1.7 | IPR019734 |
| SMART | SM00028 | tpr_5 | 1112 | 1145 | 0.0011 | IPR019734 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 985 | 37.799274 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 815 | 827 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 701 | 723 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1243 | 1257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1031 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1009 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1293 | 1307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1203 | 1224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1243 | 1310 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 3.53E-238 |
| RefSeq | XP_039819966.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Panicum virgatum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 4.54E-224 | |
| TrEMBL | A0A8T0Q1N6 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG400900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology