Basic Information
Locus ID:
AH09.2258
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 33689162 | 33693779 | + | AH09.2258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 82,898.11 Da | 43.62 | 91.05 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 504 | 752 | 2.97267E-127 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 148 | 355 | 1.4E-69 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 498 | 752 | 4.4E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 752 | 1.11E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 491 | 575 | 1.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 759 | 7.5E-60 | - |
| SMART | SM00220 | serkin_6 | 498 | 759 | 2.5E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 760 | 44.329182 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 504 | 525 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 723 | 745 | 3.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 679 | 701 | 3.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 613 | 631 | 3.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 572 | 585 | 3.9E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 660 | 670 | 3.9E-11 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 1.01E-254 |
| RefSeq | XP_039773894.1 | serine/threonine-protein kinase CTR1-like [Panicum virgatum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 7.39E-196 | |
| TrEMBL | A0A8T0QPJ7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7KG345400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology