Basic Information
Locus ID:
AH09.1990
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
SAPK2
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 31534789 | 31536075 | - | AH09.1990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.41 | 24,626.02 Da | 53.23 | 70.55 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01092 | Ribosomal protein S6e | 71 | 117 | 3.0E-15 | IPR001377 |
| Pfam | PF01092 | Ribosomal protein S6e | 33 | 74 | 1.3E-13 | IPR001377 |
| Gene3D | G3DSA:1.20.5.2650 | - | 122 | 213 | 4.5E-29 | - |
| SMART | SM01405 | Ribosomal_S6e_2 | 19 | 117 | 7.2E-37 | IPR001377 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 217 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10360.1 | Ribosomal protein S6e. RPS6A and RPS6B are fully redundant and essential during gametogenesis. | 6.57E-91 |
| RefSeq | XP_012437221.1 | 40S ribosomal protein S6 isoform X2 [Gossypium raimondii] | 1.98E-95 |
| Q9M3V8 | Small ribosomal subunit protein eS6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1 | 3.36E-90 | |
| TrEMBL | A0A811SIJ7 | 40S ribosomal protein S6 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS64794 PE=3 SV=1 | 2.15E-95 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology