Basic Information
Locus ID:
AH09.174
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 3252265 | 3253477 | + | AH09.174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 41,815.21 Da | 54.26 | 78.13 | -0.33 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034603441.1 | uncharacterized protein LOC117863725 [Setaria viridis] | 7.54E-104 |
| TrEMBL | A0A4U6TZ52 | DUF295 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G002000v2 PE=4 SV=1 | 8.09E-132 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 14 | AH01.2523, AH09.173, AH09.174, BH05.2976, BH09.248, BH09.249 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_4AG0326860, gene-QOZ80_4AG0326870 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0216960.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_008931, gene-QYE76_059393, gene-QYE76_071439 ... |
| Poaceae | Oryza coarctata | 4 | Oco07G000410, Oco07G000420, Oco08G001100, Oco08G001110 |
| Poaceae | Oryza sativa | 5 | LOC_Os04g08070.1, LOC_Os04g08110.1, LOC_Os04g08160.1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_06G024900, gene-BS78_09G061200 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0100159, Pt_Chr0100276, Pt_Chr0504713, Pt_Chr0600870 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G186700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG006610 |
| Poaceae | Triticum aestivum | 23 | TraesCS1B02G056200.1.cds1, TraesCS1D02G043800.1.cds1 ... |