halophFGD

Basic Information

Locus ID: AH09.1730

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Heat shock chaperonin-binding motif.

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH09	29268678	29271834	+	AH09.1730

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.52	64,606.97 Da	35.69	68.39	-0.85

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13432	Tetratricopeptide repeat	7	67	4.1E-5	-
Pfam	PF13414	TPR repeat	396	437	7.4E-10	-
Pfam	PF17830	STI1 domain	138	191	2.4E-19	IPR041243
Pfam	PF17830	STI1 domain	519	570	3.1E-14	IPR041243
Pfam	PF07719	Tetratricopeptide repeat	70	103	1.8E-5	IPR013105
Pfam	PF13181	Tetratricopeptide repeat	288	312	0.06	IPR019734
Pfam	PF13181	Tetratricopeptide repeat	257	282	0.11	IPR019734
SUPERFAMILY	SSF48452	TPR-like	2	113	2.6E-37	IPR011990
SUPERFAMILY	SSF48452	TPR-like	388	501	1.46E-42	IPR011990
SUPERFAMILY	SSF48452	TPR-like	249	376	1.1E-42	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	1	115	1.2E-36	IPR011990
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	388	502	2.1E-36	IPR011990
Gene3D	G3DSA:1.10.260.100	-	128	195	1.1E-19	-
Gene3D	G3DSA:1.25.40.10	Tetratricopeptide repeat domain	247	383	4.6E-41	IPR011990
Gene3D	G3DSA:1.10.260.100	-	509	578	2.5E-24	-
SMART	SM00028	tpr_5	250	283	0.0076	IPR019734
SMART	SM00028	tpr_5	2	35	0.023	IPR019734
SMART	SM00028	tpr_5	325	362	48.0	IPR019734
SMART	SM00028	tpr_5	457	490	8.6E-5	IPR019734
SMART	SM00028	tpr_5	389	422	6.5E-4	IPR019734
SMART	SM00727	CBM	527	566	2.2E-9	IPR006636
SMART	SM00727	CBM	137	176	8.2E-5	IPR006636
SMART	SM00028	tpr_5	284	317	7.5E-4	IPR019734
SMART	SM00028	tpr_5	70	103	9.1E-6	IPR019734
SMART	SM00028	tpr_5	36	69	1.3	IPR019734
SMART	SM00028	tpr_5	423	456	1.8E-4	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	389	422	10.1484	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	423	456	8.2899	IPR019734
ProSiteProfiles	PS50293	TPR repeat region circular profile.	70	103	9.058457	-
ProSiteProfiles	PS50005	TPR repeat profile.	2	35	9.2634	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	70	103	12.1544	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	250	283	9.6174	IPR019734
ProSiteProfiles	PS50005	TPR repeat profile.	457	490	9.6764	IPR019734
MobiDBLite	mobidb-lite	consensus disorder prediction	219	259	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	199	259	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	111	131	-	-
Coils	Coil	Coil	361	381	-	-
Coils	Coil	Coil	234	254	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K09553 (stress-induced-phosphoprotein 1)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G62740.1	stress-inducible protein, putative.	1.87E-230
RefSeq	XP_004976378.1	hsp70-Hsp90 organizing protein [Setaria italica]	1.99E-288
Swiss-Prot	F8RP11	Hsp70-Hsp90 organizing protein OS=Triticum aestivum OX=4565 GN=HOP PE=1 SV=1	3.49E-256
TrEMBL	K3Y658	TPR_REGION domain-containing protein OS=Setaria italica OX=4555 GN=101774932 PE=4 SV=1	4.5E-287

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	2	jg23371, jg37233
Aizoaceae	Mesembryanthemum crystallinum	1	gene_1932
Amaranthaceae	Atriplex hortensis	1	Ah004749
Amaranthaceae	Beta vulgaris	2	BVRB_5g098030, BVRB_6g145050
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg24337, Sbi_jg8171
Amaranthaceae	Salicornia europaea	1	Seu_jg11847
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00001516
Amaranthaceae	Suaeda glauca	1	Sgl56891
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000008001, gene:ENSEOMG00000020965 ... gene:ENSEOMG00000024273
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.5AG0000580, CQ.Regalona.r1.5BG0000590
Anacardiaceae	Pistacia vera	1	pistato.v30142990
Apiaceae	Apium graveolens	3	Ag6G00625, Ag6G01745, Ag6G02616
Arecaceae	Cocos nucifera	2	COCNU_10G004330, scaffold005462G000020
Arecaceae	Phoenix dactylifera	1	gene-LOC103708511
Asparagaceae	Asparagus officinalis	1	AsparagusV1_10.277.V1.1
Asteraceae	Flaveria trinervia	2	Ftri14G30651, Ftri16G04267
Brassicaceae	Arabidopsis thaliana	3	AT1G12270.1, AT1G62740.1, AT4G12400.2
Brassicaceae	Eutrema salsugineum	3	Thhalv10007205m.g.v1.0, Thhalv10023385m.g.v1.0 ... Thhalv10028542m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g10890.v2.2, Sp2g01900.v2.2, Sp6g05150.v2.2
Brassicaceae	Brassica nigra	6	BniB02g007040.2N, BniB02g007050.2N, BniB02g010350.2N ... BniB02g058810.2N, BniB04g021610.2N, BniB05g056300.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G0077
Casuarinaceae	Casuarina glauca	1	Cgl03G0083
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g08510, gene.Cymno03g07710
Dunaliellaceae	Dunaliella salina	1	Dusal.0549s00002.v1.0
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g06620
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.1304, evm.TU.LG10.1243
Plantaginaceae	Plantago ovata	1	Pov_00004214
Plumbaginaceae	Limonium bicolor	2	Lb2G08978, Lb8G36485
Poaceae	Echinochloa crus-galli	6	AH07.2799, AH09.1730, BH07.2609, BH09.1910, CH07.2674 ... CH09.2063
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_2AG0139090, gene-QOZ80_2BG0194740 ... gene-QOZ80_4AG0309120, gene-QOZ80_4BG0340140
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.2HG0184620.1, HORVU.MOREX.r3.6HG0599080.1
Poaceae	Lolium multiflorum	2	gene-QYE76_024019, gene-QYE76_045246
Poaceae	Oryza coarctata	4	Oco03G016570, Oco04G017340, Oco07G011740, Oco08G011420
Poaceae	Oryza sativa	2	LOC_Os02g43020.1, LOC_Os04g45480.1
Poaceae	Paspalum vaginatum	2	gene-BS78_04G211500, gene-BS78_06G172500
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0201606, Pt_Chr0204042, Pt_Chr0207518, Pt_Chr0301875
Poaceae	Sporobolus alterniflorus	6	Chr06G006380, Chr09G024750, Chr13G006270, Chr15G008090 ... Chr25G006440, Chr30G006270
Poaceae	Thinopyrum elongatum	2	Tel2E01G663300, Tel6E01G452300
Poaceae	Triticum dicoccoides	5	gene_TRIDC2AG055670, gene_TRIDC2BG058540 ... gene_TRIDC5AG033520, gene_TRIDC6AG036790, gene_TRIDC6BG043580
Poaceae	Triticum aestivum	7	TraesCS2A02G386800.1, TraesCS2B02G404400.1 ... TraesCS2D02G117300.1, TraesCS2D02G383600.1, TraesCS6A02G238600.1, TraesCS6B02G285800.1, TraesCS6D02G221000.1
Poaceae	Zea mays	3	Zm00001eb075450_P002, Zm00001eb186100_P001 ... Zm00001eb248730_P001
Poaceae	Zoysia japonica	3	nbis-gene-22451, nbis-gene-37197, nbis-gene-9339
Poaceae	Zoysia macrostachya	3	Zma_g13997, Zma_g16761, Zma_g20136
Portulacaceae	Portulaca oleracea	4	evm.TU.LG08.441, evm.TU.LG10.189, evm.TU.LG17.185 ... evm.TU.LG22.1456
Posidoniaceae	Posidonia oceanica	1	gene.Posoc02g19450
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_14_RagTag.312, evm.TU.Scaffold_16_RagTag.294
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-18065, nbisL1-mrna-22535, nbisL1-mrna-31001
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-5215, nbisL1-mrna-7515
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-20233, nbisL1-mrna-8407
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000007l.181, evm.TU.utg000022l.317
Rhizophoraceae	Kandelia obovata	2	Maker00014231, Maker00018599
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-16124, nbisL1-mrna-3456
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-10778, nbisL1-mrna-6583
Salicaceae	Populus euphratica	3	populus_peu03416, populus_peu03417, populus_peu34256
Solanaceae	Lycium barbarum	2	gene-LOC132609834, gene-LOC132635070
Solanaceae	Solanum chilense	1	SOLCI005886600
Solanaceae	Solanum pennellii	1	gene-LOC107028487
Tamaricaceae	Reaumuria soongarica	1	STRG.13614_chr05_+
Tamaricaceae	Tamarix chinensis	1	TC02G0115
Zosteraceae	Zostera marina	1	Zosma01g13100.v3.1