Basic Information
Locus ID:
AH09.1575
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 27642282 | 27643306 | + | AH09.1575 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 35,768.85 Da | 50.49 | 83.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 168 | 296 | 2.2E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 31 | 163 | 5.2E-24 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 300 | 7.53E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 8 | 165 | 3.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 313 | 2.8E-33 | - |
| SMART | SM00220 | serkin_6 | 31 | 296 | 6.4E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 31 | 296 | 30.32239 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 37 | 60 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 323 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.2 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 8.94E-39 |
| RefSeq | XP_025798029.1 | putative cyclin-dependent kinase F-2 [Panicum hallii] | 2.67E-158 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.09E-60 | |
| TrEMBL | A0A1E5V081 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020441 PE=3 SV=1 | 1.03E-174 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology