Basic Information
Locus ID:
AH09.1322
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Raffinose synthase or seed imbibition protein Sip1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH09 | 25276580 | 25281151 | - | AH09.1322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 110,024.99 Da | 51.80 | 81.28 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 271 | 991 | 1.1E-244 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 459 | 780 | 1.62E-46 | IPR017853 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 459 | 778 | 3.1E-10 | IPR013785 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 199 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 2.39E-241 |
| RefSeq | XP_039773244.1 | probable galactinol--sucrose galactosyltransferase 2 [Panicum virgatum] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 2.3E-240 | |
| TrEMBL | A0A8T0QD90 | galactinol--sucrose galactosyltransferase OS=Panicum virgatum OX=38727 GN=PVAP13_7KG206700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology