Basic Information
Locus ID:
AH08.96
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 968279 | 970433 | + | AH08.96 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 60,573.80 Da | 44.73 | 82.61 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 242 | 433 | 1.28E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 496 | 4.4E-14 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 129 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002443737.1 | uncharacterized protein LOC8068547 [Sorghum bicolor] | 1.9E-155 |
| TrEMBL | A0A1B6PF30 | F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G011500 PE=4 SV=1 | 1.45E-138 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.96, BH08.43 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_07G013400, gene-BS78_07G014400 ... |