Basic Information
Locus ID:
AH08.959
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 15420987 | 15421670 | - | AH08.959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.23 | 26,027.00 Da | 83.47 | 88.59 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 30 | 77 | 1.2E-8 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 211 | 1.14E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 78 | 5.76E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 105 | 218 | 1.3E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 25 | 76 | 3.8E-11 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 27 | 75 | 10.901672 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974567.1 | putative F-box/LRR-repeat protein 22 [Setaria italica] | 3.59E-100 |
| TrEMBL | A0A368RK51 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G103000v2 PE=4 SV=1 | 8.12E-99 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||