Basic Information
Locus ID:
AH08.947
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 15102795 | 15106858 | - | AH08.947 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.54 | 62,581.74 Da | 66.81 | 64.20 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 324 | 381 | 6.04E-5 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 301 | 399 | 4.0E-6 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 436 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 126 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18950.1 | Transducin/WD40 repeat-like superfamily protein. | 5.56E-17 |
| RefSeq | XP_002442434.2 | protein JINGUBANG [Sorghum bicolor] | 2.97E-18 |
| O48716 | Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1 | 6.71E-14 | |
| TrEMBL | A0A835KJR5 | WD_REPEATS_REGION domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_014935 PE=4 SV=1 | 6.24E-22 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||