Basic Information
Locus ID:
AH08.839
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 12622554 | 12624338 | + | AH08.839 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 24,744.02 Da | 36.07 | 99.28 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 157 | 219 | 1.1E-14 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 145 | 6.4E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 221 | 8.57E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 222 | 8.0E-25 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 42 | 141 | 7.7E-24 | - |
| SMART | SM00220 | serkin_6 | 82 | 222 | 6.0E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 82 | 222 | 22.492153 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 88 | 110 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11480.2 | - | 2.25E-60 |
| RefSeq | XP_022683115.1 | cysteine-rich receptor-like protein kinase 6 isoform X1 [Setaria italica] | 2.15E-111 |
| Q9LDM5 | Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana OX=3702 GN=CRK31 PE=3 SV=1 | 1.8E-58 | |
| TrEMBL | A0A368RK30 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G093000v2 PE=4 SV=1 | 4.87E-110 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g187070 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30198570 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g04370 |
| Poaceae | Echinochloa crus-galli | 1 | AH08.839 |