Basic Information
Locus ID:
AH08.769
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 10828272 | 10834007 | - | AH08.769 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 61,006.78 Da | 52.69 | 95.31 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 286 | 342 | 3.66E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 386 | 530 | 2.35E-16 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 293 | 335 | 1.2E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 356 | 544 | 4.8E-20 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 291 | 338 | 8.649649 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039853085.1 | putative F-box/LRR-repeat protein 23 [Panicum virgatum] | 4.19E-112 |
| TrEMBL | A0A8T0R9L9 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG081200 PE=4 SV=1 | 9.48E-111 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||