Basic Information
Locus ID:
AH08.728
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 10042051 | 10042533 | + | AH08.728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 17,720.16 Da | 36.90 | 56.19 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 23 | 116 | 1.92289E-14 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 115 | 3.6E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 147 | 3.2E-15 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 160 | 11.211492 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037486331.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 5.77E-34 |
| TrEMBL | A0A2T7D4Z4 | BTB domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G076000 PE=4 SV=1 | 1.19E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH05.1237, AH06.2058, AH08.728, AH08.759, BH08.738 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000485, gene-QYE76_000491 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G606100, Tel7E01G877400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-51292 |