Basic Information
Locus ID:
AH08.726
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Filament-like plant protein, long coiled-coil
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 10000073 | 10000910 | - | AH08.726 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 12,040.97 Da | 49.63 | 66.34 | -0.55 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77580.1 | Plant protein of unknown function (DUF869). | 8.8E-11 |
| RefSeq | XP_025806349.1 | filament-like plant protein 1 isoform X2 [Panicum hallii] | 3.37E-19 |
| Q9CAP9 | Filament-like plant protein 1 OS=Arabidopsis thaliana OX=3702 GN=FPP1 PE=2 SV=1 | 8.92E-10 | |
| TrEMBL | A0A835F2D7 | Filament-like plant protein OS=Digitaria exilis OX=1010633 GN=HU200_019746 PE=3 SV=1 | 3.0E-18 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB03g058380.2N |
| Poaceae | Echinochloa crus-galli | 24 | AH01.4755, AH02.2722, AH04.1015, AH05.1286, AH05.1766 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1BG0063290 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0136190.1 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g46770.1 |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_01G057300, gene-BS78_02G211300, gene-BS78_K021000 ... |
| Poaceae | Sporobolus alterniflorus | 18 | Chr01G028140, Chr02G020120, Chr02G020680, Chr03G014060 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G440600 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG030720, gene_TRIDC2AG037920 ... |
| Poaceae | Zea mays | 4 | Zm00001eb009750_P001, Zm00001eb012990_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-21483 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g10439 |