Basic Information
Locus ID:
AH08.661
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Steroid receptor RNA activator (SRA1)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 8159220 | 8162775 | - | AH08.661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 48,078.80 Da | 48.49 | 86.85 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 27 | 424 | 1.67E-25 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 205 | 428 | 4.1E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 25 | 188 | 1.4E-5 | IPR015943 |
| SMART | SM00320 | WD40_4 | 252 | 291 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 385 | 422 | 0.88 | IPR001680 |
| SMART | SM00320 | WD40_4 | 293 | 336 | 38.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 77 | 124 | 65.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 338 | 381 | 53.0 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TrEMBL | A0A811NWJ1 | START domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS22092 PE=4 SV=1 | 5.7E-92 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH08.661, BH05.1181 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG003870, gene_TRIDC4BG047910 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G028500.1, TraesCS4B02G277500.1 |