Basic Information
Locus ID:
AH08.594
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 7065104 | 7067625 | - | AH08.594 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 77,452.22 Da | 52.31 | 69.18 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 60 | 3.53E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 102 | 325 | 4.12E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 130 | 338 | 3.8E-7 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 672 | 694 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 504 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 451 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60610.1 | F-box/RNI-like superfamily protein. | 2.59E-6 |
| RefSeq | XP_039807060.1 | uncharacterized protein LOC120670930 [Panicum virgatum] | 3.72E-277 |
| TrEMBL | A0A8T0T5H4 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG046076 PE=4 SV=1 | 8.41E-276 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology