Basic Information
Locus ID:
AH08.479
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 5161248 | 5207609 | - | AH08.479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 44,835.92 Da | 48.25 | 88.95 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 231 | 376 | 8.63E-15 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 137 | 189 | 1.1E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 139 | 181 | 4.7E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 399 | 4.4E-20 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039853085.1 | putative F-box/LRR-repeat protein 23 [Panicum virgatum] | 2.45E-115 |
| TrEMBL | A0A8T0R9L9 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG081200 PE=4 SV=1 | 5.54E-114 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||