Basic Information
Locus ID:
AH08.478
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 5144673 | 5147630 | - | AH08.478 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 32,940.83 Da | 44.96 | 93.92 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 119 | 263 | 1.08E-16 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 76 | 3.92E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 26 | 68 | 4.2E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 75 | 286 | 4.0E-20 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52480.1 | RNI-like superfamily protein. | 6.6E-24 |
| RefSeq | XP_039853085.1 | putative F-box/LRR-repeat protein 23 [Panicum virgatum] | 6.76E-116 |
| TrEMBL | A0A8T0R9L9 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG081200 PE=4 SV=1 | 1.53E-114 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||