Basic Information
Locus ID:
AH08.464
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 4929267 | 4930690 | + | AH08.464 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.40 | 49,859.01 Da | 82.17 | 72.07 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 408 | 449 | 2.25349E-8 | - |
| Pfam | PF13639 | Ring finger domain | 407 | 449 | 1.3E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 394 | 452 | 7.85E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 381 | 453 | 3.3E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 408 | 448 | 1.8E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 408 | 449 | 11.205767 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 398 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 209 | - | - |
| Coils | Coil | Coil | 150 | 177 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 2.13E-59 |
| TrEMBL | A0A2S3I0K8 | RING-type domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_6G051500 PE=4 SV=1 | 9.36E-137 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology