Basic Information
Locus ID:
AH08.414
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 4367549 | 4380353 | + | AH08.414 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 217,394.20 Da | 43.15 | 102.88 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 377 | 494 | 0.0060794 | - |
| Pfam | PF00069 | Protein kinase domain | 23 | 301 | 1.5E-46 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 443 | 600 | 6.2E-19 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 380 | 421 | 1.6E-5 | IPR002182 |
| Pfam | PF13520 | Amino acid permease | 1485 | 1882 | 3.5E-35 | IPR002293 |
| SUPERFAMILY | SSF52058 | L domain-like | 950 | 1402 | 6.46E-22 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 360 | 614 | 4.17E-47 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 303 | 2.29E-63 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 760 | 1026 | 1.8E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 308 | 3.5E-45 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 428 | 505 | 4.7E-8 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 718 | 1043 | 3.6E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 595 | 694 | 2.2E-9 | IPR036388 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 93 | 7.2E-24 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 364 | 427 | 3.7E-11 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1270 | 1444 | 1.0E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1050 | 1269 | 1.4E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 1483 | 1903 | 1.1E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 758 | 780 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 21 | 301 | 5.7E-21 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 827 | 849 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 963 | 987 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 308 | 35.73571 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 400 | 415 | 2.8E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 547 | 561 | 2.8E-10 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 985 | 1001 | 2.8E-10 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31830.2 | Amino acid permease family protein. | 8.23E-231 |
| RefSeq | XP_039776658.1 | disease resistance protein RGA2-like isoform X6 [Panicum virgatum] | 0 |
| Q9C6S5 | Probable polyamine transporter At1g31830 OS=Arabidopsis thaliana OX=3702 GN=At1g31830 PE=2 SV=1 | 1.42E-229 | |
| TrEMBL | A0A8T0P4X7 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG242600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology