Basic Information
Locus ID:
AH08.358
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 3699909 | 3701546 | + | AH08.358 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 58,135.36 Da | 33.89 | 89.45 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 37 | 209 | 5.7E-20 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 422 | 484 | 2.1E-7 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 34 | 212 | 7.12E-30 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 37 | 214 | 2.5E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 35 | 207 | 3.2E-20 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 37 | 213 | 19.21661 | IPR002035 |
| Coils | Coil | Coil | 391 | 411 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 1.12E-37 |
| RefSeq | XP_037458590.1 | E3 ubiquitin-protein ligase WAV3-like [Triticum dicoccoides] | 1.43E-144 |
| Q9ZQ46 | E3 ubiquitin-protein ligase WAVH1 OS=Arabidopsis thaliana OX=3702 GN=WAVH1 PE=1 SV=1 | 1.16E-12 | |
| TrEMBL | A0A3B6RA72 | VWFA domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 1.3E-142 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology