Basic Information
Locus ID:
AH08.2120
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
atbpm1,bpm1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 38056277 | 38057287 | + | AH08.2120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 36,817.15 Da | 38.24 | 85.92 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 12 | 140 | 1.02113E-19 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 161 | 268 | 1.6E-17 | IPR000210 |
| Pfam | PF00917 | MATH domain | 32 | 141 | 5.3E-6 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 271 | 5.76E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 11 | 143 | 2.29E-22 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 144 | 267 | 3.7E-27 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 273 | 336 | 1.5E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 10 | 143 | 5.7E-21 | IPR008974 |
| SMART | SM00225 | BTB_4 | 168 | 273 | 2.7E-14 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 13 | 139 | 13.81958 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 168 | 236 | 13.425663 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 1.19E-47 |
| RefSeq | XP_039817830.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 4.0E-128 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 1.16E-46 | |
| TrEMBL | A0A835DXM6 | Speckle-type POZ protein-like protein OS=Digitaria exilis OX=1010633 GN=HU200_065805 PE=4 SV=1 | 1.6E-131 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology