Basic Information
Locus ID:
AH08.2116
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 38010384 | 38012238 | - | AH08.2116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 40,807.67 Da | 41.27 | 76.07 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 206 | 279 | 1.19297E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 321 | 376 | 1.5E-9 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 206 | 280 | 8.18E-9 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 311 | 376 | 2.2E-12 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 198 | 288 | 2.0E-8 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 299 | 379 | 9.2E-16 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 329 | 356 | 11.750422 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 311 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 1.73E-19 |
| RefSeq | XP_034601357.1 | BTB/POZ and MATH domain-containing protein 1-like [Setaria viridis] | 1.64E-55 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 1.71E-18 | |
| TrEMBL | A0A4U6UKZ9 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G223400v2 PE=4 SV=1 | 1.71E-53 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||