Basic Information
Locus ID:
AH08.2071
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 37561573 | 37563904 | + | AH08.2071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 75,331.75 Da | 40.23 | 88.25 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 401 | 666 | 2.4E-23 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 131 | 190 | 2.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 79 | 2.3E-10 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 671 | 2.91E-41 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 65 | 232 | 8.08E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 472 | 1.5E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 473 | 699 | 7.8E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 126 | 3.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 127 | 249 | 1.1E-26 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 397 | 689 | 22.223608 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 682 | 704 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 1.1E-129 |
| RefSeq | XP_034601344.1 | pollen receptor-like kinase 4 [Setaria viridis] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 1.06E-128 | |
| TrEMBL | A0A4U6U693 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G218200v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology