Basic Information
Locus ID:
AH08.1938
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 36221666 | 36222466 | - | AH08.1938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 29,385.17 Da | 31.78 | 78.08 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 43 | 3.4E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 42 | 7.19E-9 | IPR036047 |
| SUPERFAMILY | SSF50969 | YVTN repeat-like/Quinoprotein amine dehydrogenase | 52 | 242 | 2.82E-5 | IPR011044 |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 53 | 2.2E-7 | - |
| SMART | SM00256 | fbox_2 | 9 | 49 | 6.0E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 93 | 233 | 9.1E-19 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822450.1 | F-box protein At3g07870-like [Panicum hallii] | 3.67E-77 |
| TrEMBL | A0A835A729 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_061671 PE=4 SV=1 | 1.76E-96 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology