Basic Information
Locus ID:
AH08.1916
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 36017058 | 36018312 | - | AH08.1916 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 44,050.51 Da | 52.18 | 78.57 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 7 | 41 | 9.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 42 | 6.67E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 45 | 8.5E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 49 | 8.4E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 102 | 303 | 1.6E-14 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025822450.1 | F-box protein At3g07870-like [Panicum hallii] | 7.15E-95 |
| TrEMBL | A0A368RPY1 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G194100v2 PE=4 SV=1 | 3.12E-135 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology